| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0648 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 687010 |
|---|
| End bp | 688443 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | rfaE bifunctional protein |
|---|
| Protein accession | ACX38334 |
|---|
| Protein GI | 260447912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA CGCTGCCAGA GTTTGAACGT GCAGGAGTGA TGGTGGTTGG TGATGTGATG
CTGGATCGTT ACTGGTACGG CCCCACCAGT CGTATCTCGC CGGAAGCGCC GGTGCCCGTG
GTTAAAGTGA ATACCATCGA AGAACGTCCG GGCGGCGCGG CTAACGTGGC GATGAATATC
GCTTCTCTCG GTGCTAATGC ACGCCTGGTC GGGTTGACGG GCATTGACGA TGCAGCGCGC
GCGCTGAGTA AATCTCTGGC CGACGTCAAC GTCAAATGCG ACTTCGTTTC TGTACCGACG
CATCCGACCA TTACCAAATT ACGGGTACTT TCCCGCAACC AACAGCTGAT CCGTCTGGAT
TTTGAAGAAG GTTTCGAAGG TGTTGATCCG CAGCCGCTGC ACGAGCGGAT TAATCAGGCG
CTGAGTTCGA TTGGCGCGCT GGTGCTTTCT GACTACGCCA AAGGTGCGCT GGCAAGCGTA
CAGCAGATGA TCCAACTGGC GCGTAAAGCG GGTGTTCCGG TGCTGATTGA TCCAAAAGGT
ACCGATTTTG AGCGCTACCG CGGCGCTACG CTGTTAACGC CGAATCTCTC GGAATTTGAA
GCTGTTGTCG GTAAATGTAA GACCGAAGAA GAGATTGTTG AGCGCGGCAT GAAACTGATT
GCCGATTACG AACTCTCGGC TCTGTTAGTG ACCCGTTCCG AACAGGGTAT GTCGCTGCTG
CAACCGGGTA AAGCGCCGCT GCATATGCCA ACCCAAGCGC AGGAAGTGTA TGACGTTACC
GGTGCGGGCG ACACGGTGAT TGGCGTCCTG GCGGCAACGC TGGCAGCGGG TAATTCGCTG
GAAGAAGCCT GCTTCTTTGC CAATGCGGCG GCTGGCGTGG TGGTCGGCAA ACTGGGAACC
TCCACGGTTT CGCCGATCGA GCTGGAAAAT GCTGTACGTG GACGTGCAGA TACAGGCTTT
GGCGTGATGA CCGAAGAGGA ACTGAAGCTG GCCGTAGCGG CAGCGCGTAA ACGTGGTGAA
AAAGTGGTGA TGACCAACGG TGTCTTTGAC ATCCTGCACG CCGGGCACGT CTCTTATCTG
GCAAATGCCC GCAAGCTGGG TGACCGCTTG ATTGTTGCCG TCAACAGCGA TGCCTCCACC
AAACGGCTGA AAGGGGATTC CCGCCCGGTA AACCCACTCG AACAGCGTAT GATTGTGCTG
GGCGCACTGG AAGCGGTCGA CTGGGTAGTG TCGTTTGAAG AGGACACGCC GCAGCGCTTG
ATCGCCGGGA TCTTGCCAGA TCTGCTGGTG AAAGGCGGCG ACTATAAACC AGAAGAGATT
GCCGGGAGTA AAGAAGTCTG GGCCAACGGT GGCGAAGTGT TGGTGCTCAA CTTTGAAGAC
GGTTGCTCGA CGACCAACAT CATCAAGAAG ATCCAACAGG ATAAAAAAGG CTAA
|
|---|
| Protein sequence | MKVTLPEFER AGVMVVGDVM LDRYWYGPTS RISPEAPVPV VKVNTIEERP GGAANVAMNI
ASLGANARLV GLTGIDDAAR ALSKSLADVN VKCDFVSVPT HPTITKLRVL SRNQQLIRLD
FEEGFEGVDP QPLHERINQA LSSIGALVLS DYAKGALASV QQMIQLARKA GVPVLIDPKG
TDFERYRGAT LLTPNLSEFE AVVGKCKTEE EIVERGMKLI ADYELSALLV TRSEQGMSLL
QPGKAPLHMP TQAQEVYDVT GAGDTVIGVL AATLAAGNSL EEACFFANAA AGVVVGKLGT
STVSPIELEN AVRGRADTGF GVMTEEELKL AVAAARKRGE KVVMTNGVFD ILHAGHVSYL
ANARKLGDRL IVAVNSDAST KRLKGDSRPV NPLEQRMIVL GALEAVDWVV SFEEDTPQRL
IAGILPDLLV KGGDYKPEEI AGSKEVWANG GEVLVLNFED GCSTTNIIKK IQQDKKG
|
|---|
| |