Gene EcDH1_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0612 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp642576 
End bp643820 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID 
Productsodium:dicarboxylate symporter 
Protein accessionACX38299 
Protein GI260447877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.842719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGC AACGTTCACC GGGGCTATTC CGGCGTCTGG CTCATGGCAG CCTGGTAAAA 
CAAATCCTGG TCGGCCTTGT TCTGGGGATT CTTCTGGCAT GGATCTCAAA ACCCGCGGCG
GAAGCTGTTG GTCTGTTAGG TACTTTGTTC GTCGGCGCAC TGAAAGCCGT TGCCCCCATC
CTGGTGTTGA TGCTGGTGAT GGCATCTATT GCTAACCACC AGCACGGGCA GAAAACCAAT
ATCCGCCCTA TTTTGTTCCT CTATCTACTG GGCACCTTCT CTGCTGCTCT GGCCGCAGTA
GTCTTCAGCT TTGCCTTCCC TTCTACCCTG CATTTATCCA GTAGCGCGGG TGATATTTCG
CCGCCGTCAG GCATTGTCGA AGTGATGCGC GGGCTGGTAA TGAGCATGGT TTCCAACCCC
ATCGACGCGC TGCTGAAAGG TAACTACATC GGGATTCTGG TGTGGGCGAT CGGCCTCGGT
TTCGCACTGC GTCACGGTAA CGAGACCACC AAAAACCTGG TTAACGATAT GTCGAATGCC
GTTACCTTTA TGGTGAAACT GGTCATTCGC TTCGCACCGA TTGGTATTTT TGGGCTGGTT
TCTTCTACCC TGGCAACCAC CGGTTTCTCC ACACTGTGGG GCTACGCGCA ACTGCTGGTC
GTGCTGGTTG GCTGTATGTT ACTGGTGGCG CTGGTGGTTA ACCCATTGCT GGTGTGGTGG
AAAATTCGTC GTAACCCGTT CCCGCTGGTG CTGCTGTGCC TGCGCGAAAG CGGTGTGTAT
GCCTTCTTCA CCCGCAGCTC TGCAGCGAAC ATTCCGGTGA ATATGGCGCT GTGTGAAAAG
CTGAATCTGG ATCGCGATAC CTATTCCGTT TCTATTCCGC TGGGAGCCAC CATCAATATG
GCGGGCGCAG CAATCACTAT TACCGTGTTG ACGCTGGCTG CGGTTAATAC GCTGGGTATT
CCGGTCGATC TGCCCACGGC GCTGCTGTTG AGCGTGGTGG CTTCTCTGTG TGCCTGTGGC
GCATCCGGCG TGGCGGGGGG GTCTCTGCTG CTGATCCCAC TGGCCTGTAA TATGTTCGGT
ATTTCGAACG ATATCGCCAT GCAGGTGGTT GCCGTCGGCT TTATCATCGG CGTATTGCAG
GACTCTTGCG AAACCGCGCT GAACTCTTCA ACTGACGTGC TGTTCACTGC GGCAGCTTGC
CAGGCAGAAG ACGATCGTCT GGCAAATAGC GCCCTGCGTA ATTAA
 
Protein sequence
MTTQRSPGLF RRLAHGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPI 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAGDIS
PPSGIVEVMR GLVMSMVSNP IDALLKGNYI GILVWAIGLG FALRHGNETT KNLVNDMSNA
VTFMVKLVIR FAPIGIFGLV SSTLATTGFS TLWGYAQLLV VLVGCMLLVA LVVNPLLVWW
KIRRNPFPLV LLCLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM
AGAAITITVL TLAAVNTLGI PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG
ISNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDDRLANS ALRN