Gene EcDH1_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0587 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp618747 
End bp620078 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content50% 
IMG OID 
Productserine transporter 
Protein accessionACX38274 
Protein GI260447852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTT CAGATAGCAT TGTATCCAGC CAGACAAAAC AATCGTCCTG GCGTAAATCA 
GATACCACAT GGACGTTAGG CTTGTTTGGT ACGGCAATCG GCGCCGGGGT GCTGTTCTTC
CCTATCCGCG CAGGTTTTGG CGGACTGATC CCGATTCTTC TGATGTTGGT ATTGGCATAC
CCCATCGCGT TTTATTGCCA CCGGGCGCTG GCGCGTCTGT GTCTTTCTGG CTCTAACCCT
TCCGGCAACA TTACGGAAAC GGTGGAAGAG CATTTTGGTA AAACTGGCGG CGTGGTTATC
ACGTTCCTGT ACTTCTTCGC GATTTGCCCA CTGCTGTGGA TTTATGGCGT TACTATTACC
AATACCTTTA TGACGTTCTG GGAAAACCAG CTCGGCTTTG CACCGCTGAA TCGCGGCTTT
GTGGCGCTGT TCCTGTTGCT GCTGATGGCT TTCGTCATCT GGTTTGGTAA GGATCTGATG
GTTAAAGTGA TGAGCTACCT GGTATGGCCG TTTATCGCCA GCCTGGTGCT GATTTCTTTG
TCGCTGATCC CTTACTGGAA CTCTGCAGTT ATCGACCAGG TTGACCTCGG TTCGCTGTCG
TTAACCGGTC ATGACGGTAT CCTGATCACT GTCTGGCTGG GGATTTCCAT CATGGTTTTC
TCCTTTAACT TCTCGCCAAT CGTCTCTTCC TTCGTGGTTT CTAAGCGTGA AGAGTATGAG
AAAGACTTCG GTCGCGACTT CACCGAACGT AAATGTTCCC AAATCATTTC TCGTGCCAGC
ATGCTGATGG TTGCAGTGGT GATGTTCTTT GCCTTTAGCT GCCTGTTTAC TCTGTCTCCG
GCCAACATGG CGGAAGCCAA AGCGCAGAAT ATTCCAGTGC TTTCTTATCT GGCTAACCAC
TTTGCGTCCA TGACCGGTAC CAAAACAACG TTCGCGATTA CACTGGAATA TGCGGCTTCC
ATCATCGCAC TCGTGGCTAT CTTCAAATCT TTCTTCGGTC ACTATCTGGG AACGCTGGAA
GGTCTGAATG GCCTGGTCCT GAAGTTTGGT TATAAAGGCG ACAAAACTAA AGTGTCGCTG
GGTAAACTGA ACACTATCAG CATGATCTTC ATCATGGGCT CCACCTGGGT TGTTGCCTAC
GCCAACCCGA ACATCCTTGA CCTGATTGAA GCCATGGGCG CACCGATTAT CGCATCCCTG
CTGTGCCTGT TGCCGATGTA TGCCATCCGT AAAGCGCCGT CTCTGGCGAA ATACCGTGGT
CGTCTGGATA ACGTGTTTGT TACCGTGATT GGTCTGCTGA CCATCCTGAA CATCGTATAC
AAACTGTTTT AA
 
Protein sequence
MSTSDSIVSS QTKQSSWRKS DTTWTLGLFG TAIGAGVLFF PIRAGFGGLI PILLMLVLAY 
PIAFYCHRAL ARLCLSGSNP SGNITETVEE HFGKTGGVVI TFLYFFAICP LLWIYGVTIT
NTFMTFWENQ LGFAPLNRGF VALFLLLLMA FVIWFGKDLM VKVMSYLVWP FIASLVLISL
SLIPYWNSAV IDQVDLGSLS LTGHDGILIT VWLGISIMVF SFNFSPIVSS FVVSKREEYE
KDFGRDFTER KCSQIISRAS MLMVAVVMFF AFSCLFTLSP ANMAEAKAQN IPVLSYLANH
FASMTGTKTT FAITLEYAAS IIALVAIFKS FFGHYLGTLE GLNGLVLKFG YKGDKTKVSL
GKLNTISMIF IMGSTWVVAY ANPNILDLIE AMGAPIIASL LCLLPMYAIR KAPSLAKYRG
RLDNVFVTVI GLLTILNIVY KLF