Gene EcDH1_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0560 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp591332 
End bp592423 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID 
Productputative fimbrial protein 
Protein accessionACX38248 
Protein GI260447826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAG CGCCTCTTAT AACAGGTCTT TTGTTGATAT CCACATCCTG CGCTTATGCC 
TCCTCAGGAG GGTGTGGAGC CGACAGCACT AGCGGTGCGA CAAATTACAG CAGTGTGGTT
GATGATGTTA CGGTGAACCA GACAGATAAC GTGACAGGAC GGGAGTTTAC CTCTGCAACG
CTAAGTAGCA CTAACTGGCA ATACGCCTGT TCCTGCTCTG CGGGTAAGGC AGTTAAACTT
GTCTATATGG TCAGCCCCGT ACTTACCACC ACTGGACATC AGACAGGATA TTACAAACTC
AATGACAGCC TGGATATTAA AACCACATTA CAGGCAAACG ACATTCCAGG ACTCACAACC
GACCAGGTTG TCTCTGTTAA CACCCGATTC ACACAGATAA AAAACAACAC GGTATATTCT
GCTGCAACCC AAACGGGTGT TTGCCAGGGT GATACGTCTC GTTATGGACC CGTTAATATT
GGTGCGAACA CCACCTTTAC CCTGTATGTC ACCAAGCCAT TTCTCGGCTC GATGACCATT
CCGAAAACGG ATATTGCCGT CATTAAAGGC GCGTGGGTCG ATGGAATGGG AAGCCCGTCT
ACAGGTGACT TCCATGATTT AGTCAAGTTA TCGATTCAGG GAAATCTCAC CGCCCCACAG
TCGTGCAAAA TTAATCAGGG CGATGTTATT AAGGTTAATT TTGGATTCAT CAATGGTCAG
AAGTTTACCA CCCGCAATGC CATGCCAGAC GGTTTTACTC CAGTAGACTT TGATATCACT
TATGACTGTG GTGATACTTC AAAGATTAAA AACTCGTTGC AAATGCGCAT CGACGGTACA
ACTGGGGTAG TAGACCAGTA CAACCTGGTC GCCAGGCGAA GAAGTTCAGA CAATGTGCCC
GATGTCGGTA TTCGTATTGA AAATCTCGGC GGCGGAGTTG CAAATATTCC TTTTCAGAAC
GGTATCCTTC CTGTTGATCC TTCCGGGCAT GGCACCGTCA ATATGCGCGC CTGGCCAGTT
AATCTGGTCG GTGGTGAGCT GGAAACAGGA AAATTTCAGG GCACAGCCAC CATTACCGTC
ATCGTGCGGT AA
 
Protein sequence
MKRAPLITGL LLISTSCAYA SSGGCGADST SGATNYSSVV DDVTVNQTDN VTGREFTSAT 
LSSTNWQYAC SCSAGKAVKL VYMVSPVLTT TGHQTGYYKL NDSLDIKTTL QANDIPGLTT
DQVVSVNTRF TQIKNNTVYS AATQTGVCQG DTSRYGPVNI GANTTFTLYV TKPFLGSMTI
PKTDIAVIKG AWVDGMGSPS TGDFHDLVKL SIQGNLTAPQ SCKINQGDVI KVNFGFINGQ
KFTTRNAMPD GFTPVDFDIT YDCGDTSKIK NSLQMRIDGT TGVVDQYNLV ARRRSSDNVP
DVGIRIENLG GGVANIPFQN GILPVDPSGH GTVNMRAWPV NLVGGELETG KFQGTATITV
IVR