Gene EcDH1_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0543 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp575904 
End bp577793 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content56% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionACX38231 
Protein GI260447809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAT TCGAAACCAC TTTTGCAGAT CTGGGCCTGA AGGCTCCTAT CCTTGAAGCC 
CTTAACGATC TGGGTTACGA AAAACCATCT CCAATTCAGG CAGAGTGTAT TCCACATCTG
CTGAATGGCC GCGACGTTCT GGGTATGGCC CAGACGGGGA GCGGAAAAAC TGCAGCATTC
TCTTTACCTC TGTTGCAGAA TCTTGATCCT GAGCTGAAAG CACCACAGAT TCTGGTGCTG
GCACCGACCC GCGAACTGGC GGTACAGGTT GCTGAAGCAA TGACGGATTT CTCTAAACAC
ATGCGCGGCG TAAATGTGGT TGCTCTGTAC GGCGGCCAGC GTTATGACGT GCAATTACGC
GCCCTGCGTC AGGGGCCGCA GATCGTTGTC GGTACTCCGG GCCGTCTGCT GGACCACCTG
AAACGTGGCA CTCTGGACCT CTCTAAACTG AGCGGTCTGG TTCTGGATGA AGCTGACGAA
ATGCTGCGCA TGGGCTTCAT CGAAGACGTT GAAACCATTA TGGCGCAGAT CCCGGAAGGT
CATCAGACCG CTCTGTTCTC TGCAACCATG CCGGAAGCGA TTCGTCGCAT TACCCGCCGC
TTTATGAAAG AGCCGCAGGA AGTGCGCATT CAGTCCAGCG TGACTACCCG TCCTGACATC
AGCCAGAGCT ACTGGACTGT CTGGGGTATG CGCAAAAACG AAGCACTGGT ACGTTTCCTG
GAAGCGGAAG ATTTTGATGC GGCGATTATC TTCGTTCGTA CCAAAAACGC GACTCTGGAA
GTGGCTGAAG CTCTTGAGCG TAACGGCTAC AACAGCGCCG CGCTGAACGG TGACATGAAC
CAGGCGCTGC GTGAACAGAC ACTGGAACGC CTGAAAGATG GTCGTCTGGA CATCCTGATT
GCGACCGACG TTGCAGCCCG TGGCCTGGAC GTTGAGCGTA TCAGCCTGGT AGTTAACTAC
GATATCCCGA TGGATTCTGA GTCTTACGTT CACCGTATCG GTCGTACCGG TCGTGCGGGT
CGTGCTGGCC GCGCGCTGCT GTTCGTTGAG AACCGCGAGC GTCGTCTGCT GCGCAACATT
GAACGTACTA TGAAGCTGAC TATTCCGGAA GTAGAACTGC CGAACGCAGA ACTGCTAGGC
AAACGCCGTC TGGAAAAATT CGCCGCTAAA GTACAGCAGC AGCTGGAAAG CAGCGATCTG
GATCAATACC GCGCACTGCT GAGCAAAATT CAGCCGACTG CTGAAGGTGA AGAGCTGGAT
CTCGAAACTC TGGCTGCGGC ACTGCTGAAA ATGGCACAGG GTGAACGTAC TCTGATCGTA
CCGCCAGATG CGCCGATGCG TCCGAAACGT GAATTCCGTG ACCGTGATGA CCGTGGTCCG
CGCGATCGTA ACGACCGTGG CCCGCGTGGT GACCGTGAAG ATCGTCCGCG TCGTGAACGT
CGTGATGTTG GCGATATGCA GCTGTACCGC ATTGAAGTGG GCCGCGATGA TGGTGTTGAA
GTTCGTCATA TCGTTGGTGC GATTGCTAAC GAAGGCGACA TCAGCAGCCG TTACATTGGT
AACATCAAGC TGTTTGCTTC TCACTCCACC ATCGAACTGC CGAAAGGTAT GCCGGGTGAA
GTGCTGCAAC ACTTTACGCG CACTCGCATT CTCAACAAGC CGATGAACAT GCAGTTACTG
GGCGATGCAC AGCCGCATAC TGGCGGTGAG CGTCGTGGCG GTGGTCGTGG TTTCGGTGGC
GAACGTCGTG AAGGCGGTCG TAACTTCAGC GGTGAACGCC GTGAAGGTGG CCGTGGTGAT
GGTCGTCGTT TTAGCGGCGA ACGTCGTGAA GGCCGCGCTC CGCGTCGTGA TGATTCTACC
GGTCGTCGTC GTTTCGGTGG TGATGCGTAA
 
Protein sequence
MAEFETTFAD LGLKAPILEA LNDLGYEKPS PIQAECIPHL LNGRDVLGMA QTGSGKTAAF 
SLPLLQNLDP ELKAPQILVL APTRELAVQV AEAMTDFSKH MRGVNVVALY GGQRYDVQLR
ALRQGPQIVV GTPGRLLDHL KRGTLDLSKL SGLVLDEADE MLRMGFIEDV ETIMAQIPEG
HQTALFSATM PEAIRRITRR FMKEPQEVRI QSSVTTRPDI SQSYWTVWGM RKNEALVRFL
EAEDFDAAII FVRTKNATLE VAEALERNGY NSAALNGDMN QALREQTLER LKDGRLDILI
ATDVAARGLD VERISLVVNY DIPMDSESYV HRIGRTGRAG RAGRALLFVE NRERRLLRNI
ERTMKLTIPE VELPNAELLG KRRLEKFAAK VQQQLESSDL DQYRALLSKI QPTAEGEELD
LETLAAALLK MAQGERTLIV PPDAPMRPKR EFRDRDDRGP RDRNDRGPRG DREDRPRRER
RDVGDMQLYR IEVGRDDGVE VRHIVGAIAN EGDISSRYIG NIKLFASHST IELPKGMPGE
VLQHFTRTRI LNKPMNMQLL GDAQPHTGGE RRGGGRGFGG ERREGGRNFS GERREGGRGD
GRRFSGERRE GRAPRRDDST GRRRFGGDA