Gene EcDH1_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0525 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp553368 
End bp554801 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content53% 
IMG OID 
ProductD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 
Protein accessionACX38213 
Protein GI260447791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000050929 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTT CCAGATTTAT CATCGGATTG ACCAGCTGTA TAGCGTTCAG TGTTCAGGCC 
GCAAATGTTG ATGAGTACAT TACTCAACTC CCCGCTGGTG CCAACCTTGC CCTGATGGTG
CAAAAAGTCG GCGCGTCGGC CCCCGCTATT GATTACCACA GTCAGCAGAT GGCGCTGCCT
GCCAGTACCC AGAAAGTGAT TACTGCGCTG GCGGCGTTGA TTCAACTCGG CCCCGATTTT
CGTTTTACCA CGACGCTTGA AACCAAAGGC AATGTGGAAA ACGGCGTACT TAAGGGTGAC
TTAGTGGCGC GATTTGGTGC CGATCCGACG TTAAAACGTC AGGATATTCG CAATATGGTC
GCGACTTTGA AAAAATCTGG CGTCAACCAA ATCGATGGCA ATGTGTTGAT AGATACCTCC
ATTTTCGCCA GCCACGATAA AGCCCCCGGC TGGCCATGGA ATGACATGAC ACAATGCTTT
AGCGCTCCGC CTGCCGCCGC CATAGTTGAC CGCAACTGTT TCTCCGTCTC GCTCTACAGT
GCCCCAAAGC CTGGTGATAT GGCTTTTATA CGCGTGGCAT CTTATTACCC CGTTACGATG
TTCAGCCAGG TACGCACCCT CCCCCGTGGT TCTGCCGAAG CGCAATACTG CGAACTGGAT
GTGGTGCCAG GCGACCTGAA CCGCTTTACG CTGACGGGAT GCCTGCCACA ACGTTCTGAG
CCGCTCCCGT TGGCTTTTGC CGTGCAGGAT GGAGCCAGCT ATGCCGGTGC AATTCTGAAA
TATGAGTTAA AACAGGCGGG TATCACCTGG AGCGGAACAC TGCTGCGCCA GACTCAGGTT
AACGAACCTG GAACGGTAGT TGCCAGTAAA CAGTCGGCCC CGCTGCACGA TCTGCTTAAG
ATTATGCTGA AAAAGTCGGA CAACATGATC GCCGATACGG TTTTCCGCAT GATAGGCCAT
GCGCGCTTCA ATGTGCCTGG AACATGGCGG GCCGGGTCGG ACGCCGTGCG TCAGATCCTG
CGCCAGCAAG CCGGTGTCGA TATTGGAAAC ACCATTATTG CCGATGGTTC AGGGCTTTCG
CGGCATAACC TGATTGCCCC CGCCACCATG ATGCAGGTGC TGCAATACAT TGCCCAACAC
GACAATGAAC TTAACTTTAT CTCCATGCTG CCGCTGGCGG GCTATGACGG CTCTTTGCAG
TACCGTGCAG GTCTGCATCA GGCGGGCGTG GATGGAAAAG TCTCAGCGAA AACCGGTTCG
TTGCAGGGGG TATATAACCT GGCGGGATTC ATTACCACAG CGAGCGGGCA ACGAATGGCG
TTTGTGCAAT ATCTTTCTGG CTATGCAGTA GAACCTGCGG ATCAGCGTAA TCGCCGTATT
CCGTTAGTGC GTTTTGAAAG CCGTTTGTAT AAAGATATTT ATCAGAACAA TTAG
 
Protein sequence
MRFSRFIIGL TSCIAFSVQA ANVDEYITQL PAGANLALMV QKVGASAPAI DYHSQQMALP 
ASTQKVITAL AALIQLGPDF RFTTTLETKG NVENGVLKGD LVARFGADPT LKRQDIRNMV
ATLKKSGVNQ IDGNVLIDTS IFASHDKAPG WPWNDMTQCF SAPPAAAIVD RNCFSVSLYS
APKPGDMAFI RVASYYPVTM FSQVRTLPRG SAEAQYCELD VVPGDLNRFT LTGCLPQRSE
PLPLAFAVQD GASYAGAILK YELKQAGITW SGTLLRQTQV NEPGTVVASK QSAPLHDLLK
IMLKKSDNMI ADTVFRMIGH ARFNVPGTWR AGSDAVRQIL RQQAGVDIGN TIIADGSGLS
RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ YRAGLHQAGV DGKVSAKTGS
LQGVYNLAGF ITTASGQRMA FVQYLSGYAV EPADQRNRRI PLVRFESRLY KDIYQNN