Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0505 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 537614 |
End bp | 539047 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | ACX38193 |
Protein GI | 260447771 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAG GTTTGCAACT CAGGCTTAGC CAACAACTGG CGATGACGCC ACAGCTCCAA CAGGCAATTC GTCTGTTGCA GTTGTCGACG CTGGAACTTC AGCAGGAGCT ACAGCAGGCG CTGGAGAGTA ATCCGCTGCT TGAGCAAATC GACACTCATG AAGAAATCGA CACCCGCGAA ACGCAAGACA GTGAAACGCT GGACACCGCC GACGCGCTCG AACAAAAAGA GATGCCGGAA GAGCTGCCGC TCGATGCCAG TTGGGACACC ATTTACACCG CTGGTACACC ATCCGGCACC AGCGGTGACT ACATTGACGA CGAGCTGCCG GTCTACCAGG GCGAAACGAC GCAGACCTTG CAGGATTACC TGATGTGGCA GGTTGAGCTG ACACCGTTTT CCGACACTGA CCGCGCTATT GCTACCTCTA TCGTCGATGC CGTTGATGAA ACCGGTTATC TGACTGTCCC GCTGGAAGAT ATTCTCGAAA GTATAGGCGA TGAAGAGATC GACATCGACG AAGTTGAAGC CGTCCTTAAG CGGATCCAAC GGTTTGATCC GGTCGGTGTG GCGGCAAAAG ATCTGCGTGA CTGTCTGCTG ATCCAACTCT CCCAATTCGA TAAGACCACG CCGTGGCTGG AAGAGGCCAG ACTGATCATT AGCGATCATC TCGATCTGTT AGCCAATCAC GACTTCCGCA CTTTAATGCG CGTCACGCGT CTGAAAGAAG ATGTGCTGAA AGAAGCCGTC AATCTGATCC AGTCGCTCGA TCCGCGCCCC GGGCAGTCGA TCCAGACTGG CGAACCTGAG TATGTCATTC CAGATGTGCT GGTGCGTAAG CATAACGGTC ACTGGACGGT AGAACTCAAC AGTGACAGCA TTCCGCGTCT GCAAATCAAC CAGCACTACG CCTCGATGTG CAATAACGCG CGCAACGATG GTGACAGCCA GTTTATCCGC AGCAATCTGC AGGATGCCAA ATGGTTGATC AAGAGTCTGG AAAGCCGTAA CGATACGCTA CTGCGCGTGA GTCGCTGTAT CGTTGAACAG CAGCAAGCCT TCTTTGAGCA AGGTGAAGAA TATATGAAAC CGATGGTACT GGCCGATATC GCCCAGGCTG TCGAAATGCA TGAATCGACG ATATCTCGCG TGACCACGCA AAAATACCTG CATAGTCCAC GAGGCATTTT TGAACTGAAG TATTTCTTTT CCAGTCACGT CAATACCGAG GGCGGCGGCG AAGCTTCCTC CACGGCGATT CGTGCGCTGG TGAAGAAATT AATCGCGGCG GAAAACCCAG CGAAACCGTT GAGCGACAGC AAGTTAACCT CTTTGCTGTC GGAACAAGGT ATCATGGTGG CACGCCGCAC TGTTGCGAAG TACCGAGAGT CTTTATCCAT TCCGCCGTCA AACCAGCGTA AACAACTCGT TTGA
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Protein sequence | MKQGLQLRLS QQLAMTPQLQ QAIRLLQLST LELQQELQQA LESNPLLEQI DTHEEIDTRE TQDSETLDTA DALEQKEMPE ELPLDASWDT IYTAGTPSGT SGDYIDDELP VYQGETTQTL QDYLMWQVEL TPFSDTDRAI ATSIVDAVDE TGYLTVPLED ILESIGDEEI DIDEVEAVLK RIQRFDPVGV AAKDLRDCLL IQLSQFDKTT PWLEEARLII SDHLDLLANH DFRTLMRVTR LKEDVLKEAV NLIQSLDPRP GQSIQTGEPE YVIPDVLVRK HNGHWTVELN SDSIPRLQIN QHYASMCNNA RNDGDSQFIR SNLQDAKWLI KSLESRNDTL LRVSRCIVEQ QQAFFEQGEE YMKPMVLADI AQAVEMHEST ISRVTTQKYL HSPRGIFELK YFFSSHVNTE GGGEASSTAI RALVKKLIAA ENPAKPLSDS KLTSLLSEQG IMVARRTVAK YRESLSIPPS NQRKQLV
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