Gene EcDH1_0480 details

Gene Information

• Locus tag: EcDH1_0480
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 509275
• End bp: 510066
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 52%
• Product: regulatory protein GntR HTH
• Protein accession: ACX38168
• Protein GI: 260447746

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.143431
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCCTTA TGAACGCATT TGATTCGCAA ACCGAAGATT CTTCACCTGC AATTGGTCGC 
AACTTGCGTA GCCGCCCGCT GGCGCGTAAA AAACTCTCCG AAATGGTGGA AGAAGAGCTG 
GAACAGATGA TCCGCCGTCG TGAATTTGGC GAAGGTGAAC AATTACCGTC TGAACGCGAA 
CTGATGGCGT TCTTTAACGT CGGGCGTCCT TCGGTGCGTG AAGCGCTGGC AGCGTTAAAA 
CGCAAAGGTC TGGTGCAAAT AAACAACGGC GAACGCGCTC GCGTCTCGCG TCCTTCTGCG 
GACACTATCA TCGGTGAGCT TTCCGGCATG GCGAAAGATT TCCTTTCTCA TCCCGGTGGG 
ATTGCCCATT TCGAACAATT ACGTCTGTTC TTTGAATCCA GTCTGGTGCG CTATGCGGCT 
GAACATGCCA CCGATGAGCA AATCGATTTG CTGGCAAAAG CACTGGAAAT CAACAGTCAG 
TCGCTGGATA ACAACGCGGC ATTCATTCGT TCAGACGTTG ATTTCCACCG CGTGCTGGCG 
GAGATCCCCG GTAACCCAAT CTTCATGGCG ATCCACGTTG CCCTGCTCGA CTGGCTTATT 
GCCGCACGCC CAACGGTTAC CGATCAGGCA CTGCACGAAC ATAACAACGT TAGTTATCAA 
CAGCATATTG CGATCGTTGA TGCGATCCGC CGTCATGATC CTGACGAAGC CGATCGTGCG 
TTGCAATCGC ATCTCAACAG CGTCTCTGCT ACCTGGCACG CTTTCGGTCA GACCACCAAC 
AAAAAGAAAT AA 

 

Protein sequence

MGLMNAFDSQ TEDSSPAIGR NLRSRPLARK KLSEMVEEEL EQMIRRREFG EGEQLPSERE 
LMAFFNVGRP SVREALAALK RKGLVQINNG ERARVSRPSA DTIIGELSGM AKDFLSHPGG 
IAHFEQLRLF FESSLVRYAA EHATDEQIDL LAKALEINSQ SLDNNAAFIR SDVDFHRVLA 
EIPGNPIFMA IHVALLDWLI AARPTVTDQA LHEHNNVSYQ QHIAIVDAIR RHDPDEADRA 
LQSHLNSVSA TWHAFGQTTN KKK