Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0471 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 500497 |
End bp | 501564 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | periplasmic serine protease DegS |
Protein accession | ACX38159 |
Protein GI | 260447737 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.183239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGTGA AGCTCTTACG TTCCGTTGCG ATTGGATTAA TTGTCGGCGC TATTCTGCTG GTTGCCATGC CTTCGCTGCG CAGCCTTAAC CCGCTTTCCA CTCCGCAATT TGACAGTACC GATGAGACGC CTGCCAGCTA TAATCTGGCG GTTCGCCGCG CCGCGCCAGC GGTGGTTAAC GTTTACAACC GTGGTTTGAA CACCAACTCT CACAACCAGC TTGAGATCCG CACCCTGGGA TCCGGTGTAA TCATGGATCA ACGCGGTTAT ATCATCACCA ATAAACACGT CATCAACGAC GCCGATCAGA TCATCGTCGC CTTACAGGAT GGACGTGTAT TTGAAGCATT GCTGGTGGGA TCTGACTCTC TAACCGATCT GGCGGTACTT AAAATTAATG CCACTGGCGG TTTACCTACC ATTCCAATTA ATGCACGTCG CGTACCGCAC ATTGGCGACG TAGTACTGGC GATCGGTAAC CCGTACAACC TCGGGCAGAC CATTACCCAG GGGATTATTA GTGCCACGGG TCGAATCGGT CTGAACCCGA CCGGGCGGCA AAACTTCCTC CAAACCGATG CTTCCATTAA CCACGGTAAC TCTGGCGGCG CGCTGGTGAA CTCGCTGGGC GAACTGATGG GCATTAATAC GCTGTCGTTT GATAAGAGTA ACGATGGCGA AACGCCGGAA GGTATCGGCT TTGCGATTCC TTTCCAGTTA GCAACCAAAA TTATGGATAA GCTGATCCGC GATGGTCGCG TGATCCGCGG CTACATTGGT ATCGGCGGAC GTGAGATCGC ACCACTGCAC GCGCAGGGCG GTGGTATAGA TCAACTGCAA GGGATCGTGG TTAATGAAGT GTCACCTGAC GGCCCGGCGG CGAATGCGGG TATTCAGGTC AACGATCTGA TTATTTCGGT GGATAACAAA CCGGCCATCT CTGCTCTGGA GACGATGGAT CAGGTGGCGG AAATTCGCCC TGGTTCGGTG ATCCCTGTAG TAGTGATGCG TGATGATAAG CAGTTAACGC TGCAGGTCAC CATTCAGGAA TATCCGGCAA CCAATTAA
|
Protein sequence | MFVKLLRSVA IGLIVGAILL VAMPSLRSLN PLSTPQFDST DETPASYNLA VRRAAPAVVN VYNRGLNTNS HNQLEIRTLG SGVIMDQRGY IITNKHVIND ADQIIVALQD GRVFEALLVG SDSLTDLAVL KINATGGLPT IPINARRVPH IGDVVLAIGN PYNLGQTITQ GIISATGRIG LNPTGRQNFL QTDASINHGN SGGALVNSLG ELMGINTLSF DKSNDGETPE GIGFAIPFQL ATKIMDKLIR DGRVIRGYIG IGGREIAPLH AQGGGIDQLQ GIVVNEVSPD GPAANAGIQV NDLIISVDNK PAISALETMD QVAEIRPGSV IPVVVMRDDK QLTLQVTIQE YPATN
|
| |