Gene EcDH1_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0441 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp468743 
End bp469900 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content52% 
IMG OID 
Productefflux transporter, RND family, MFP subunit 
Protein accessionACX38130 
Protein GI260447708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC ATGCCAGGTT TTTCCTCCTG CCCTCCTTTA TTCTGATCTC CGCGGCTTTA 
ATCGCCGGTT GTAACGATAA GGGAGAAGAG AAAGCTCACG TCGGTGAACC GCAGGTTACC
GTTCATATTG TAAAAACGGC CCCGTTAGAA GTTAAGACTG AATTACCAGG CCGCACCAAT
GCTTATCGTA TAGCCGAAGT TCGCCCACAG GTTAGCGGGA TCGTACTGAA TCGCAATTTC
ACTGAAGGCA GCGATGTGCA AGCAGGCCAG TCCCTGTACC AGATCGATCC CGCGACCTAT
CAGGCAAATT ATGACAGCGC GAAAGGCGAA CTGGCGAAAA GTGAAGCCGC CGCCGCCATC
GCGCATTTGA CGGTAAAACG TTACGTTCCG CTCGTGGGTA CGAAATACAT CAGCCAGCAG
GAGTACGACC AGGCCATTGC TGATGCTCGT CAGGCCGATG CCGCCGTGAT TGCCGCAAAA
GCCACAGTCG AAAGCGCTCG CATCAATCTT GCTTATACCA AAGTCACTGC GCCAATTAGC
GGACGTATCG GCAAATCGAC TGTGACCGAA GGCGCTCTTG TCACTAATGG GCAAACGACT
GAACTGGCGA CTGTCCAGCA GCTCGATCCT ATCTACGTTG ATGTGACCCA ATCCAGCAAC
GATTTTATGA GGCTGAAGCA ATCCGTAGAG CAAGGAAATT TGCATAAGGA AAACGCCACC
AGCAACGTAG AGTTGGTCAT GGAAAACGGT CAAACCTATC CCCTGAAAGG TACGCTGCAA
TTCTCCGATG TGACCGTTGA TGAAAGCACC GGCTCCATAA CCCTACGTGC TGTCTTCCCT
AACCCGCAAC ATACGCTTTT GCCGGGTATG TTTGTGCGTG CACGGATTGA TGAAGGCGTC
CAACCTGACG CCATTCTTAT CCCGCAACAA GGCGTTAGCC GCACACCGCG TGGTGATGCA
ACCGTGCTGA TTGTTAACGA TAAAAGTCAG GTTGAAGCGC GCCCTGTCGT TGCCAGTCAG
GCGATTGGCG ATAAATGGTT GATTAGTGAA GGACTGAAAT CTGGCGATCA AGTCATTGTC
AGCGGCCTGC AAAAAGCGCG TCCGGGAGAG CAGGTTAAAG CCACTACCGA TACCCCCGCA
GATACTGCAT CGAAGTAA
 
Protein sequence
MTKHARFFLL PSFILISAAL IAGCNDKGEE KAHVGEPQVT VHIVKTAPLE VKTELPGRTN 
AYRIAEVRPQ VSGIVLNRNF TEGSDVQAGQ SLYQIDPATY QANYDSAKGE LAKSEAAAAI
AHLTVKRYVP LVGTKYISQQ EYDQAIADAR QADAAVIAAK ATVESARINL AYTKVTAPIS
GRIGKSTVTE GALVTNGQTT ELATVQQLDP IYVDVTQSSN DFMRLKQSVE QGNLHKENAT
SNVELVMENG QTYPLKGTLQ FSDVTVDEST GSITLRAVFP NPQHTLLPGM FVRARIDEGV
QPDAILIPQQ GVSRTPRGDA TVLIVNDKSQ VEARPVVASQ AIGDKWLISE GLKSGDQVIV
SGLQKARPGE QVKATTDTPA DTASK