Gene EcDH1_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0437 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp462449 
End bp463630 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content50% 
IMG OID 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionACX38127 
Protein GI260447705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATC GCCGCTCAAC CGTTAAAGGC TCACTCTCTT TTGCCAACCC TACGGTTCGC 
GCCTGGTTAT TCCAGATCCT TGCCGTTGTT GCTGTTGTCG GCATTGTTGG TTGGTTATTT
CACAACACTG TAACGAATCT CAATAATCGT GGCATTACTT CAGGTTTTGC CTTTCTGGAT
CGCGGCGCTG GCTTCGGTAT TGTCCAGCAT TTGATCGATT ACCAGCAGGG CGACACCTAC
GGACGCGTTT TTATTGTCGG CTTACTCAAT ACGCTACTGG TTTCTGCATT GTGTATTGTG
TTCGCTTCTG TTTTGGGCTT CTTTATCGGT CTGGCGAGAC TTTCGGATAA CTGGCTGCTA
CGAAAGCTTT CCACAATTTA TATTGAGATC TTCCGTAATA TTCCCCCGCT GCTGCAAATC
TTCTTCTGGT ACTTTGCCGT GTTGCGCAAT TTGCCCGGAC CACGCCAGGC TGTGAGCGCG
TTTGATCTGG CCTTTTTGAG CAATCGTGGG CTTTATATTC CGTCACCGCA GCTGGGAGAC
GGATTTATTG CGTTTATCCT GGCTGTTGTT ATGGCTATAG TCCTTTCTGT TGGGCTATTC
CGCTTTAATA AAACATACCA GATAAAGACC GGACAACTGC GCCGCACCTG GCCGATCGCC
GCAGTGTTGA TCATTGGTTT GCCTTTACTG GCGCAATGGC TTTTTGGCGC AGCACTACAC
TGGGATGTCC CAGCCCTACG AGGCTTTAAC TTCCGCGGCG GGATGGTTTT AATTCCTGAA
CTGGCAGCCT TAACGCTGGC ACTTTCGGTT TATACATCTG CATTTATCGC CGAGATTATC
CGCGCTGGGA TCCAGGCAGT GCCTTATGGT CAACATGAAG CGGCTCGGTC ACTGGGATTA
CCCAACCCGG TTACGCTACG CCAGGTCATT ATTCCCCAGG CATTGCGGGT GATTATTCCA
CCGTTAACCA GCCAGTATCT CAACATCGTC AAAAACTCCT CTCTTGCCGC CGCTATTGGC
TATCCCGATA TGGTTTCGCT GTTTGCCGGC ACCGTGCTGA ATCAGACGGG GCAAGCCATC
GAGACGATAG CCATGACCAT GTCGGTCTAT CTGATTATCA GCCTGACTAT CTCGCTGCTG
ATGAATATCT ATAACCGCCG CATCGCGATC GTTGAACGCT AA
 
Protein sequence
MSHRRSTVKG SLSFANPTVR AWLFQILAVV AVVGIVGWLF HNTVTNLNNR GITSGFAFLD 
RGAGFGIVQH LIDYQQGDTY GRVFIVGLLN TLLVSALCIV FASVLGFFIG LARLSDNWLL
RKLSTIYIEI FRNIPPLLQI FFWYFAVLRN LPGPRQAVSA FDLAFLSNRG LYIPSPQLGD
GFIAFILAVV MAIVLSVGLF RFNKTYQIKT GQLRRTWPIA AVLIIGLPLL AQWLFGAALH
WDVPALRGFN FRGGMVLIPE LAALTLALSV YTSAFIAEII RAGIQAVPYG QHEAARSLGL
PNPVTLRQVI IPQALRVIIP PLTSQYLNIV KNSSLAAAIG YPDMVSLFAG TVLNQTGQAI
ETIAMTMSVY LIISLTISLL MNIYNRRIAI VER