Gene EcDH1_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0417 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp442089 
End bp442709 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID 
Productribosomal protein S4 
Protein accessionACX38107 
Protein GI260447685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000174636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAT ATTTGGGTCC TAAGCTCAAG CTGAGCCGTC GTGAGGGCAC CGACTTATTC 
CTTAAGTCTG GCGTTCGCGC GATCGATACC AAGTGTAAAA TTGAACAAGC TCCTGGCCAG
CACGGTGCGC GTAAACCGCG TCTGTCTGAC TATGGTGTGC AGTTGCGTGA AAAGCAAAAA
GTTCGCCGTA TCTATGGTGT GCTGGAGCGT CAGTTCCGTA ACTACTACAA AGAAGCAGCA
CGTCTGAAAG GCAACACCGG TGAAAACCTG TTGGCTCTGC TGGAAGGTCG TCTGGACAAC
GTTGTATACC GTATGGGCTT CGGTGCCACT CGTGCAGAAG CACGTCAGCT GGTTAGCCAT
AAAGCAATTA TGGTAAACGG TCGTGTTGTT AACATCGCTT CTTATCAGGT TAGTCCGAAT
GACGTTGTAA GCATTCGTGA GAAAGCGAAG AAGCAGTCTC GCGTGAAAGC CGCTCTGGAG
CTGGCTGAGC AGCGTGAAAA GCCAACCTGG CTGGAAGTTG ATGCTGGCAA GATGGAAGGT
ACGTTTAAGC GTAAGCCGGA GCGTTCTGAT CTGTCTGCGG ACATTAACGA ACACCTGATC
GTCGAGCTTT ACTCCAAGTA A
 
Protein sequence
MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIEQAPGQ HGARKPRLSD YGVQLREKQK 
VRRIYGVLER QFRNYYKEAA RLKGNTGENL LALLEGRLDN VVYRMGFGAT RAEARQLVSH
KAIMVNGRVV NIASYQVSPN DVVSIREKAK KQSRVKAALE LAEQREKPTW LEVDAGKMEG
TFKRKPERSD LSADINEHLI VELYSK