| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0408 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 437624 |
|---|
| End bp | 438157 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ribosomal protein L6 signature 1 |
|---|
| Protein accession | ACX38098 |
|---|
| Protein GI | 260447676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000001181 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTG TTGCTAAAGC ACCGGTCGTT GTTCCTGCCG GCGTTGACGT AAAAATCAAC
GGTCAGGTTA TTACGATCAA AGGTAAAAAC GGCGAGCTGA CTCGTACTCT CAACGATGCT
GTTGAAGTTA AACATGCAGA TAATACCCTG ACCTTCGGTC CGCGTGATGG TTACGCAGAC
GGTTGGGCAC AGGCTGGTAC CGCGCGTGCC CTGCTGAACT CAATGGTTAT CGGTGTTACC
GAAGGCTTCA CTAAGAAGCT GCAGCTGGTT GGTGTAGGTT ACCGTGCAGC GGTTAAAGGC
AATGTGATTA ACCTGTCTCT GGGTTTCTCT CATCCTGTTG ACCATCAGCT GCCTGCGGGT
ATCACTGCTG AATGTCCGAC TCAGACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG
ATCGGCCAGG TTGCAGCGGA TCTGCGCGCC TACCGTCGTC CTGAGCCTTA TAAAGGCAAG
GGTGTTCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA
|
|---|
| Protein sequence | MSRVAKAPVV VPAGVDVKIN GQVITIKGKN GELTRTLNDA VEVKHADNTL TFGPRDGYAD
GWAQAGTARA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVINLSLGFS HPVDHQLPAG
ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK
|
|---|
| |