Gene EcDH1_0388 details

Gene Information

• Locus tag: EcDH1_0388
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 425435
• End bp: 427387
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 50%
• Product: general secretion pathway protein D
• Protein accession: ACX38078
• Protein GI: 260447656

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGAC TCAATAAAAT CACCTGCTGC TTGCTGGCAG CACTACTCAT GCCTTGTGCA 
GGACACGCTG AGAACGAACA ATACGGCGCG AACTTCAATA ACGCCGATAT CCGCCAGTTC 
GTGGAAATAG TGGGTCAGCA TCTTGGCAAA ACGATCCTGA TCGACCCTTC GGTACAGGGA 
ACCATTTCCG TACGCAGTAA TGATACGTTT AGCCAACAGG AGTACTACCA GTTCTTTTTA 
AGTATTCTTG ATCTTTACGG TTATTCCGTG ATCACGCTGG ACAATGGTTT TCTGAAAGTG 
GTTCGCTCAG CTAATGTAAA AACATCGCCA GGGATGATTG CTGACAGTTC TCGTCCAGGC 
GTAGGTGATG AGTTGGTCAC CCGAATTGTA CCGCTTGAGA ACGTTCCTGC TCGTGACCTG 
GCCCCCCTGC TCCGCCAGAT GATGGATGCG GGTAGCGTCG GTAATGTTGT GCATTATGAA 
CCCTCCAACG TTCTTATTCT GACCGGTCGT GCCTCCACCA TTAATAAACT GATTGAAGTC 
ATAAAGCGCG TTGATGTCAT CGGCACAGAG AAGCAGCAAA TTATTCATCT GGAATATGCG 
TCAGCGGAAG ATCTCGCCGA GATTCTTAAT CAATTAATCA GCGAAAGCCA CGGTAAAAGC 
CAGATGCCAG CCCTCCTCTC CGCGAAGATT GTGGCGGATA AGCGAACCAA CTCTCTTATC 
ATCAGTGGAC CGGAAAAAGC ACGCCAGCGC ATCACTTCAT TACTGAAAAG CCTTGATGTC 
GAAGAGAGCG AGGAAGGAAA TACCCGGGTT TATTACCTGA AATATGCTAA AGCCACGAAT 
CTGGTGGAAG TGCTAACCGG TGTTTCCGAA AAGCTGAAAG ATGAAAAAGG GAATGCGCGT 
AAGCCCTCCT CTTCTGGCGC GATGGATAAC GTCGCCATTA CCGCCGATGA ACAGACTAAC 
TCTCTGGTCA TTACCGCTGA CCAGTCCGTC CAGGAAAAAC TCGCCACGGT AATTGCGCGT 
CTGGACATTC GCCGTGCACA GGTGCTGGTT GAGGCAATCA TCGTTGAAGT TCAGGATGGA 
AATGGACTAA ACCTCGGCGT GCAATGGGCG AATAAAAACG TTGGCGCACA GCAATTTACC 
AATACCGGAT TACCGATTTT TAACGCTGCG CAAGGTGTGG CTGATTATAA AAAGAATGGT 
GGGATCACCA GCGCGAATCC TGCCTGGGAT ATGTTTAGCG CCTACAATGG CATGGCCGCA 
GGCTTCTTCA ATGGCGACTG GGGAGTACTG CTTACCGCGC TGGCCAGTAA CAATAAAAAT 
GACATCCTCG CCACCCCAAG CATCGTAACG CTGGATAATA AACTCGCGTC CTTCAACGTG 
GGGCAGGATG TGCCGGTGCT ATCCGGGTCA CAGACCACTT CAGGGGATAA CGTCTTTAAT 
ACCGTCGAAC GCAAAACGGT GGGGACAAAA CTCAAAGTTA CTCCGCAGGT CAATGAAGGC 
GACGCGGTGT TGCTCGAAAT AGAGCAGGAA GTCTCCAGCG TTGACTCTTC CTCTAACTCG 
ACGCTCGGCC CGACGTTTAA TACCCGTACT ATTCAAAACG CCGTGCTGGT CAAAACCGGT 
GAAACGGTGG TCCTGGGCGG ATTGCTGGAT GATTTTTCTA AAGAGCAAGT GTCAAAGGTT 
CCTCTGCTTG GCGATATTCC TTTAGTGGGG CAACTCTTCC GCTATACCTC CACCGAGCGC 
GCTAAACGCA ACCTGATGGT ATTTATCCGT CCGACGATTA TCCGTGACGA TGATGTTTAT 
CGCTCACTGT CAAAAGAGAA ATACACCCGT TACCGTCAGG AGCAACAACA GCGGATCGAC 
GGGAAATCAA AAGCGCTGGT TGGCTCGGAA GATTTGCCGG TGCTGGATGA AAACACGTTC 
AACAGTCACG CCCCTGCGCC ATCGTCACGG TGA 

 

Protein sequence

MKGLNKITCC LLAALLMPCA GHAENEQYGA NFNNADIRQF VEIVGQHLGK TILIDPSVQG 
TISVRSNDTF SQQEYYQFFL SILDLYGYSV ITLDNGFLKV VRSANVKTSP GMIADSSRPG 
VGDELVTRIV PLENVPARDL APLLRQMMDA GSVGNVVHYE PSNVLILTGR ASTINKLIEV 
IKRVDVIGTE KQQIIHLEYA SAEDLAEILN QLISESHGKS QMPALLSAKI VADKRTNSLI 
ISGPEKARQR ITSLLKSLDV EESEEGNTRV YYLKYAKATN LVEVLTGVSE KLKDEKGNAR 
KPSSSGAMDN VAITADEQTN SLVITADQSV QEKLATVIAR LDIRRAQVLV EAIIVEVQDG 
NGLNLGVQWA NKNVGAQQFT NTGLPIFNAA QGVADYKKNG GITSANPAWD MFSAYNGMAA 
GFFNGDWGVL LTALASNNKN DILATPSIVT LDNKLASFNV GQDVPVLSGS QTTSGDNVFN 
TVERKTVGTK LKVTPQVNEG DAVLLEIEQE VSSVDSSSNS TLGPTFNTRT IQNAVLVKTG 
ETVVLGGLLD DFSKEQVSKV PLLGDIPLVG QLFRYTSTER AKRNLMVFIR PTIIRDDDVY 
RSLSKEKYTR YRQEQQQRID GKSKALVGSE DLPVLDENTF NSHAPAPSSR