Gene EcDH1_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0348 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp390015 
End bp391196 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content52% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionACX38038 
Protein GI260447616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACA GCAATCGCAT CAAGCTCACA TGGATTAGCT TTCTCTCCTA CGCACTGACT 
GGTGCGTTGG TTATTGTCAC CGGGATGGTG ATGGGAAATA TCGCCGATTA TTTCAATCTG
CCTGTTTCCA GTATGAGTAA TACCTTCACC TTCCTCAACG CCGGCATTTT AATCTCTATC
TTCCTCAACG CCTGGCTGAT GGAAATCGTC CCGTTGAAAA CGCAGTTACG TTTTGGCTTT
CTCCTGATGG TGCTGGCGGT TGCCGGTTTG ATGTTCAGCC ACAGCCTGGC GCTGTTCTCG
GCGGCGATGT TCATTCTCGG GGTGGTCAGC GGCATCACCA TGTCGATTGG TACATTCCTG
GTAACACAAA TGTATGAAGG GCGTCAGCGC GGTTCCCGCC TGTTATTTAC CGACTCCTTC
TTCAGTATGG CTGGGATGAT TTTCCCAATG ATCGCCGCGT TTCTACTGGC GCGCAGCATT
GAGTGGTACT GGGTTTATGC CTGCATCGGG CTGGTGTATG TCGCTATTTT TATTCTGACC
TTCGGCTGTG AGTTCCCGGC GCTGGGCAAA CATGCGCCAA AAACGGATGC TCCGGTAGAG
AAAGAAAAGT GGGGGATCGG CGTACTGTTT CTCTCTGTTG CGGCGTTGTG CTACATCCTC
GGTCAGTTAG GTTTTATCTC CTGGGTGCCT GAGTATGCCA AAGGCCTGGG CATGAGCCTG
AACGACGCGG GCACGCTGGT GAGTAACTTC TGGATGTCAT ACATGGTCGG CATGTGGGCG
TTCAGCTTTA TTCTTCGCTT CTTTGATTTG CAACGCATTC TGACCGTACT GGCTGGTCTG
GCTGCGATTC TGATGTACGT CTTTAACACC GGAACACCAG CACATATGGC GTGGTCAATT
CTCGCTCTGG GCTTCTTCTC CAGCGCGATC TATACCACCA TCATCACCCT GGGTTCACAG
CAGACCAAAG TACCGTCGCC AAAACTGGTT AACTTTGTCC TGACCTGCGG AACCATCGGT
ACTATGTTGA CCTTTGTGGT TACCGGCCCG ATCGTTGAAC ATAGCGGTCC GCAGGCGGCA
CTGCTTACAG CAAACGGTCT GTACGCTGTC GTCTTTGTGA TGTGCTTCCT GTTAGGTTTC
GTCAGCCGTC ACCGTCAGCA TAACACCCTG ACCTCTCATT AA
 
Protein sequence
MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFNL PVSSMSNTFT FLNAGILISI 
FLNAWLMEIV PLKTQLRFGF LLMVLAVAGL MFSHSLALFS AAMFILGVVS GITMSIGTFL
VTQMYEGRQR GSRLLFTDSF FSMAGMIFPM IAAFLLARSI EWYWVYACIG LVYVAIFILT
FGCEFPALGK HAPKTDAPVE KEKWGIGVLF LSVAALCYIL GQLGFISWVP EYAKGLGMSL
NDAGTLVSNF WMSYMVGMWA FSFILRFFDL QRILTVLAGL AAILMYVFNT GTPAHMAWSI
LALGFFSSAI YTTIITLGSQ QTKVPSPKLV NFVLTCGTIG TMLTFVVTGP IVEHSGPQAA
LLTANGLYAV VFVMCFLLGF VSRHRQHNTL TSH