Gene EcDH1_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0342 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp382517 
End bp383854 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content55% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionACX38032 
Protein GI260447610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGCC AGGAACTCCA ACGCAAGCTC GGATTTTGGG CCGTTCTTGC AATCGCCGTC 
GGGACAACCG TCGGCTCCGG TATTTTTGTA TCTGTGGGTG AAGTGGCAAA AGCAGCGGGC
ACGCCGTGGC TTACGGTGCT CGCGTTTGTC ATTGGCGGGT TAATTGTGAT CCCGCAAATG
TGCGTCTATG CGGAACTATC CACCGCTTAT CCGGAAAATG GCGCAGATTA TGTTTATCTG
AAAAATGCCG GAAGCCGACC GCTGGCTTTC CTCTCCGGCT GGGCCAGCTT CTGGGCCAAC
GATGCGCCGT CATTGTCGAT TATGGCGCTG GCGATTGTCA GCAATCTTGG CTTTTTAACG
CCTATCGATC CGTTGCTCGG TAAATTTATC GCCGCCGGAT TAATTATCGC CTTTATGTTG
CTACACCTGC GCTCCGTTGA AGGCGGCGCA GCGTTTCAGA CGCTAATTAC CATCGCCAAA
ATTATCCCGT TCACTATCGT CATTGGCCTT GGGATCTTCT GGTTTAAAGC GGAGAATTTT
GCCGCCCCTA CCACCACTGC GATTGGCGCA ACGGGCAGCT TTATGGCGCT GCTGGCGGGG
ATCTCTGCCA CCAGTTGGTC GTATACCGGC ATGGCCTCTA TCTGTTATAT GACCGGCGAA
ATTAAAAACC CCGGAAAAAC CATGCCACGA GCGCTGATTG GTTCCTGTCT GCTGGTTCTG
GTGCTCTACA CCCTGCTGGC GCTGGTGATT TCCGGCCTGA TGCCCTTCGA CAAACTCGCC
AATTCTGAAA CGCCGATTTC CGACGCCCTG ACCTGGATCC CCGCACTCGG CAGCACCGCT
GGGATCTTTG TTGCCATCAC GGCGATGATC GTCATTCTTG GTTCGCTTTC CAGCTGCGTG
ATGTACCAGC CGCGGCTGGA ATACGCGATG GCGAAAGACA ACCTGTTCTT TAAATGCTTC
GGCCATGTGC ATCCGAAATA CAACACGCCG GATGTCTCCA TCATCCTGCA AGGGGCGCTG
GGGATCTTCT TCATCTTCGT TTCCGATCTC ACCAGCCTGC TGGGTTATTT CACCCTGGTG
ATGTGTTTCA AAAATACCCT CACCTTCGGC TCCATCATCT GGTGTCGTAA ACGCGACGAT
TACAAACCGC TGTGGCGTAC TCCGGCTTTC GGGCTGATGA CCACCCTCGC CATTGCGTCA
AGCCTCATTC TGGTCGCCTC AACCTTTGTC TGGGCACCGA TTCCCGGCCT TATCTGCGCC
GTCATCGTTA TTGCTACTGG TCTGCCTGCT TACGCCTTCT GGGCGAAGCG TAGCCGCCAG
CTCAACGCTT TGTCGTAA
 
Protein sequence
MGSQELQRKL GFWAVLAIAV GTTVGSGIFV SVGEVAKAAG TPWLTVLAFV IGGLIVIPQM 
CVYAELSTAY PENGADYVYL KNAGSRPLAF LSGWASFWAN DAPSLSIMAL AIVSNLGFLT
PIDPLLGKFI AAGLIIAFML LHLRSVEGGA AFQTLITIAK IIPFTIVIGL GIFWFKAENF
AAPTTTAIGA TGSFMALLAG ISATSWSYTG MASICYMTGE IKNPGKTMPR ALIGSCLLVL
VLYTLLALVI SGLMPFDKLA NSETPISDAL TWIPALGSTA GIFVAITAMI VILGSLSSCV
MYQPRLEYAM AKDNLFFKCF GHVHPKYNTP DVSIILQGAL GIFFIFVSDL TSLLGYFTLV
MCFKNTLTFG SIIWCRKRDD YKPLWRTPAF GLMTTLAIAS SLILVASTFV WAPIPGLICA
VIVIATGLPA YAFWAKRSRQ LNALS