Gene EcDH1_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0333 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp373951 
End bp375177 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPhosphopentomutase 
Protein accessionACX38023 
Protein GI260447601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGAT TTGTGGTGTT AGTGATTGAT AGCTTTGGCG TAGGGGCAAT GAAAGATGTC 
ACGCTGGTGC GTCCGCAAGA TGCGGGAGCG AATACATGTG GTCACATCCT GAGCCAGTTG
CCGCATTTGC AGCTACCAAC GCTGGAGACG CTGGGGCTAA TCAACGCATT GGGTTATGCG
CCAGGCGATA TGCAGCCGTC AGATTCCGCA ACCTGGGGCG TGGCAGAGCT GCAACATGAA
GGTGGCGATA CCTTTATGGG GCATCAGGAA ATTTTAGGCA CGCGCCCGTT ACCGCCGCTG
CGGATGCCTT TTCGCGATGT GATTGACCGT GTTGAGCAGG CATTAGTTTC CGCTGGCTGG
CAGGTGGAGC GCCGTGGCGA TGATCTGCAA TTTCTGTGGG TCAATCAGGC GGTTGCGATT
GGCGATAATC TCGAGGCGGA TTTAGGCCAG GTCTATAACA TTACCGCCAA TCTCTCTGTG
ATCTCTTTTG ACGACGCAAT CAAAATTGGT CGTATCGTGC GTGAGCAGGT ACAGGTCGGT
CGGGTCATTA CATTTGGTGG CCTGTTAACC GACAGTCAAC GCATTCTCGA TGCCGCAGAA
AGCAAAGAAG GGCGCTTTAT TGGTATCAAT GCGCCGCGTT CTGGCGCTTA TGACAACGGT
TTCCAGGTCG TGCATATGGG CTATGGCGTC GATGAAAAAG TGCAGGTGCC ACAAAAACTG
TATGAAGCAG GCGTGCCAAC CGTGCTGGTG GGTAAGGTGG CAGATATCGT CAACAATCCT
TATGGCGTGA GCTGGCAAAA TCTGGTGGAT AGCCAGCGGA TTATGGATAT CACCCTCAAC
GAATTTAACA CCCATCCGAC GGCGTTTATT TGCACCAACA TTCAGGAAAC CGACCTCGCT
GGTCATGCAG AAGACGTCGC ACGTTATGCC GAACGTTTGC AGGTCGTTGA CCGTAACCTT
GCCCGGCTTG TTGAGGCGAT GCAGCCAGAT GATTGCCTGG TCGTGATGGC GGATCACGGC
AACGATCCGA CCATTGGTCA CAGCCACCAT ACCCGCGAAG TGGTGCCAGT GCTGGTTTAT
CAGCAAGGGA TGATCGCTAC GCAGCTCGGT GTGCGCACCA CGCTTTCTGA TGTGGGGGCT
ACCGTGTGTG AATTTTTCCG CGCGCCACCG CCACAAAATG GTCGCTCTTT TCTTTCCTCC
CTCCGGTTTG CAGGAGACAC CCTATGA
 
Protein sequence
MARFVVLVID SFGVGAMKDV TLVRPQDAGA NTCGHILSQL PHLQLPTLET LGLINALGYA 
PGDMQPSDSA TWGVAELQHE GGDTFMGHQE ILGTRPLPPL RMPFRDVIDR VEQALVSAGW
QVERRGDDLQ FLWVNQAVAI GDNLEADLGQ VYNITANLSV ISFDDAIKIG RIVREQVQVG
RVITFGGLLT DSQRILDAAE SKEGRFIGIN APRSGAYDNG FQVVHMGYGV DEKVQVPQKL
YEAGVPTVLV GKVADIVNNP YGVSWQNLVD SQRIMDITLN EFNTHPTAFI CTNIQETDLA
GHAEDVARYA ERLQVVDRNL ARLVEAMQPD DCLVVMADHG NDPTIGHSHH TREVVPVLVY
QQGMIATQLG VRTTLSDVGA TVCEFFRAPP PQNGRSFLSS LRFAGDTL