| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0324 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 365278 |
|---|
| End bp | 366366 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | ACX38014 |
|---|
| Protein GI | 260447592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000234732 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGGA TTGTCGTTAC TCTCGGGGAA CGTAGTTACC CAATTACCAT CGCATCTGGT
TTGTTTAATG AACCAGCTTC ATTCTTACCG CTGAAATCGG GCGAGCAGGT CATGTTGGTC
ACCAACGAAA CCCTGGCTCC TCTGTATCTC GATAAGGTCC GCGGCGTACT TGAACAGGCG
GGTGTTAACG TCGATAGCGT TATCCTCCCT GACGGCGAGC AGTATAAAAG CCTGGCTGTA
CTCGATACCG TCTTTACGGC GTTGTTACAA AAACCGCATG GTCGCGATAC TACGCTGGTG
GCGCTTGGCG GCGGCGTAGT GGGCGATCTG ACCGGCTTCG CGGCGGCGAG TTATCAGCGC
GGTGTCCGTT TCATTCAAGT CCCGACGACG TTACTGTCGC AGGTCGATTC CTCCGTTGGC
GGCAAAACTG CGGTCAACCA TCCCCTCGGT AAAAACATGA TTGGCGCGTT CTACCAACCT
GCTTCAGTGG TGGTGGATCT CGACTGTCTG AAAACGCTTC CCCCGCGTGA GTTAGCGTCG
GGGCTGGCAG AAGTCATCAA ATACGGCATT ATTCTTGACG GTGCGTTTTT TAACTGGCTG
GAAGAGAATC TGGATGCGTT GTTGCGTCTG GACGGTCCGG CAATGGCGTA CTGTATTCGC
CGTTGTTGTG AACTGAAGGC AGAAGTTGTC GCCGCCGACG AGCGCGAAAC CGGGTTACGT
GCTTTACTGA ATCTGGGACA CACCTTTGGT CATGCCATTG AAGCTGAAAT GGGGTATGGC
AATTGGTTAC ATGGTGAAGC GGTCGCTGCG GGTATGGTGA TGGCGGCGCG GACGTCGGAA
CGTCTCGGGC AGTTTAGTTC TGCCGAAACG CAGCGTATTA TAACCCTGCT CAAGCGGGCT
GGGTTACCGG TCAATGGGCC GCGCGAAATG TCCGCGCAGG CGTATTTACC GCATATGCTG
CGTGACAAGA AAGTCCTTGC GGGAGAGATG CGCTTAATTC TTCCGTTGGC AATTGGTAAG
AGTGAAGTTC GCAGCGGCGT TTCGCACGAG CTTGTTCTTA ACGCCATTGC CGATTGTCAA
TCAGCGTAA
|
|---|
| Protein sequence | MERIVVTLGE RSYPITIASG LFNEPASFLP LKSGEQVMLV TNETLAPLYL DKVRGVLEQA
GVNVDSVILP DGEQYKSLAV LDTVFTALLQ KPHGRDTTLV ALGGGVVGDL TGFAAASYQR
GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVVDLDCL KTLPPRELAS
GLAEVIKYGI ILDGAFFNWL EENLDALLRL DGPAMAYCIR RCCELKAEVV AADERETGLR
ALLNLGHTFG HAIEAEMGYG NWLHGEAVAA GMVMAARTSE RLGQFSSAET QRIITLLKRA
GLPVNGPREM SAQAYLPHML RDKKVLAGEM RLILPLAIGK SEVRSGVSHE LVLNAIADCQ
SA
|
|---|
| |