Gene EcDH1_0323 details

Gene Information

• Locus tag: EcDH1_0323
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 364544
• End bp: 365221
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 48%
• Product: Shikimate kinase
• Protein accession: ACX38013
• Protein GI: 260447591

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000000263169
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGATT TATTCAGTTG CCAAACCCGC TGGAGTATTG AGATAATTTT CAGTCTGACT 
CTCGCAATAT CTTATGAGGT TTCAGTTCAT GTCCTGCGGC GCTCTCTGAG CGAAGCGGGT 
TTATCATTAA CGAATAGTCT TAGTAGTACC GAAAAAATGG CAGAGAAACG CAATATCTTT 
CTGGTTGGGC CTATGGGTGC CGGAAAAAGC ACTATTGGGC GCCAGTTAGC TCAACAACTC 
AATATGGAAT TTTACGATTC CGATCAAGAG ATTGAGAAAC GAACCGGAGC TGATGTGGGC 
TGGGTTTTCG ATTTAGAAGG CGAAGAAGGC TTCCGCGATC GCGAAGAAAA GGTCATCAAT 
GAGTTGACCG AGAAACAGGG TATTGTGCTG GCTACTGGCG GCGGCTCTGT GAAATCCCGT 
GAAACGCGTA ACCGTCTTTC CGCTCGTGGC GTTGTCGTTT ATCTTGAAAC GACCATCGAA 
AAGCAACTTG CACGCACGCA GCGTGATAAA AAACGCCCGT TGCTGCACGT TGAAACACCG 
CCGCGTGAAG TTCTGGAAGC GTTGGCCAAT GAACGCAATC CGCTGTATGA AGAGATTGCC 
GACGTGACCA TTCGTACTGA TGATCAAAGC GCTAAAGTGG TTGCAAACCA GATTATTCAC 
ATGCTGGAAA GCAACTAA 

 

Protein sequence

MGDLFSCQTR WSIEIIFSLT LAISYEVSVH VLRRSLSEAG LSLTNSLSST EKMAEKRNIF 
LVGPMGAGKS TIGRQLAQQL NMEFYDSDQE IEKRTGADVG WVFDLEGEEG FRDREEKVIN 
ELTEKQGIVL ATGGGSVKSR ETRNRLSARG VVVYLETTIE KQLARTQRDK KRPLLHVETP 
PREVLEALAN ERNPLYEEIA DVTIRTDDQS AKVVANQIIH MLESN