Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0322 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 363061 |
End bp | 364299 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | type IV pilus secretin PilQ |
Protein accession | ACX38012 |
Protein GI | 260447590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000212409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAT GGATAGCCGC ACTACTGTTG ATGCTGATAC CCGGCGTACA GGCGGCAAAG CCGCAAAAAG TGACGCTGAT GGTGGATGAC GTTCCGGTAG CTCAGGTGTT GCAGGCGCTG GCTGAACAGG AGAAGTTGAA CCTGGTCGTG TCGCCAGACG TCAGCGGTAC GGTGTCGTTA CATCTAACAG ATGTTCCCTG GAAGCAGGCA CTACAAACTG TAGTGAAAAG CGCCGGACTG ATAACGCGGC AGGAAGGCAA CATTCTCTCA GTGCATTCCA TTGCCTGGCA GAATAACAAT ATCGCCCGCC AGGAGGCGGA GCAGGCGCGG GCGCAGGCAA ATCTGCCGCT GGAAAATCGC AGTATAACCC TGCAATACGC CGACGCGGGA GAACTGGCGA AAGCGGGGGA GAAGCTACTG AGTGCCAAAG GGAGTATGAC CGTCGATAAA CGCACCAATC GCCTTTTGCT ACGAGATAAC AAAACGGCGT TAAGCGCGCT TGAACAGTGG GTAGCGCAAA TGGATCTGCC GGTCGGGCAG GTTGAGCTGT CGGCGCATAT TGTCACCATT AATGAAAAAA GTTTGCGTGA GTTAGGCGTG AAATGGACGC TGGCCGATGC GCAACACGCT GGTGGCGTTG GGCAAGTCAC CACGCTTGGT AGCGACCTCT CCGTAGCGAC GGCGACAACG CATGTCGGTT TTAACATTGG GCGCATCAAC GGACGCTTGC TGGATCTTGA GCTTTCCGCG CTCGAACAAA AACAGCAGCT GGATATTATC GCCAGTCCGC GTCTGCTGGC CTCACATCTT CAGCCTGCCA GCATTAAACA GGGGAGCGAA ATTCCATATC AGGTTTCCAG CGGGGAAAGT GGCGCGACGT CGGTGGAATT TAAAGAGGCC GTCCTGGGGA TGGAGGTCAC GCCCACGGTG TTACAAAAAG GTCGCATCCG GCTGAAATTA CACATCAGCC AGAACGTTCC GGGGCAGGTG CTACAGCAGG CCGATGGCGA AGTGCTGGCG ATTGATAAGC AGGAGATCGA AACGCAGGTC GAGGTCAAAA GCGGAGAAAC GTTGGCGCTG GGCGGCATTT TTACCCGTAA AAATAAATCG GGTCAGGATA GCGTACCGTT GCTTGGCGAC ATTCCCTGGT TCGGGCAATT ATTTCGTCAT GACGGAAAAG AAGATGAACG ACGCGAGTTA GTGGTGTTTA TCACGCCACG ACTGGTTTCC AGTGAGTAA
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Protein sequence | MKQWIAALLL MLIPGVQAAK PQKVTLMVDD VPVAQVLQAL AEQEKLNLVV SPDVSGTVSL HLTDVPWKQA LQTVVKSAGL ITRQEGNILS VHSIAWQNNN IARQEAEQAR AQANLPLENR SITLQYADAG ELAKAGEKLL SAKGSMTVDK RTNRLLLRDN KTALSALEQW VAQMDLPVGQ VELSAHIVTI NEKSLRELGV KWTLADAQHA GGVGQVTTLG SDLSVATATT HVGFNIGRIN GRLLDLELSA LEQKQQLDII ASPRLLASHL QPASIKQGSE IPYQVSSGES GATSVEFKEA VLGMEVTPTV LQKGRIRLKL HISQNVPGQV LQQADGEVLA IDKQEIETQV EVKSGETLAL GGIFTRKNKS GQDSVPLLGD IPWFGQLFRH DGKEDERREL VVFITPRLVS SE
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