Gene EcDH1_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0306 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp344058 
End bp346379 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content57% 
IMG OID 
ProductRNA binding S1 domain protein 
Protein accessionACX37996 
Protein GI260447574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATG ATTCGTTCTG CCGCATTATT GCGGGTGAAA TTCAGGCGCG CCCGGAACAG 
GTTGACGCTG CCGTTCGCCT GCTTGACGAA GGGAATACCG TGCCGTTTAT CGCACGTTAT
CGTAAGGAAA TCACCGGCGG TCTGGATGAC ACGCAGCTGC GTAATCTGGA AACGCGTCTG
AGCTATCTGC GCGAGCTGGA AGAGAGACGT CAGGCGATCC TCAAGTCCAT TTCCGAGCAA
GGCAAACTCA CCGATGATCT GGCGAAGGCC ATCAACGCCA CCCTAAGCAA AACCGAACTC
GAAGACCTCT ACCTGCCCTA CAAACCTAAA CGCCGCACCC GCGGGCAAAT CGCCATTGAA
GCAGGGCTTG AGCCGTTGGC TGACCTGCTG TGGAGCGATC CGTCACACAC GCCAGAAGTC
GCCGCTGCAC AATATGTTTA TGCCGATAAA GGCGTGGCAG ATACCAAAGC CGCGCTGGAT
GGCGCGCGCT ATATCCTGAT GGAACGGTTT GCCGAAGATG CCGCGCTGCT GGCGAAAGTG
CGTGATTATC TGTGGAAGAA CGCGCATTTG GTTTCTACGG TGGTGAGCGG TAAAGAAGAG
GAAGGGGCGA AATTCCGCGA CTATTTCGAT CATCACGAAC CGTTGTCCAC GGTGCCTTCT
CACCGCGCGC TGGCGATGTT CCGTGGGCGT AACGAAGGCG TACTTCAGCT TTCGCTGAAT
GCCGATCCAC AGTTCGATGA GCCGCCCAAA GAGAGCTATT GCGAGCAAAT CATCATGGAT
CACCTTGGCC TGCGCCTGAA CAATGCCCCG GCGGATAGCT GGCGCAAAGG CGTGGTGAGC
TGGACGTGGC GCATCAAGGT GCTGATGCAT CTGGAAACCG AACTGATGGG CACCGTGCGC
GAACGTGCGG AAGATGAAGC AATCAACGTC TTTGCCCGTA ACCTGCACGA TCTGCTGATG
GCGGCCCCTG CCGGACTGCG TGCAACGATG GGCCTCGATC CGGGTCTGCG TACTGGGGTA
AAAGTGGCGG TGGTCGATGC CACTGGCAAA CTGGTGGCGA CCGACACCAT TTACCCGCAC
ACCGGACAGG CCGCAAAAGC AGCGATGACC GTTGCTGCGC TGTGTGAAAA ACATAACGTT
GAACTGGTAG CGATCGGTAA CGGTACAGCT TCCCGCGAAA CTGAGCGTTT CTATCTCGAT
GTGCAGAAGC AGTTCCCGAA AGTGACCGCG CAGAAAGTAA TCGTCAGCGA AGCAGGCGCG
TCGGTTTACT CGGCTTCCGA GCTGGCTGCA CAGGAGTTCC CGGATCTCGA CGTTTCGCTG
CGTGGCGCGG TGTCTATCGC CCGCCGTTTG CAGGATCCGC TGGCGGAGCT GGTGAAAATC
GATCCGAAAT CTATCGGCGT AGGTCAGTAT CAGCATGACG TCAGCCAGAC GCAACTGGCC
CGCAAACTGG ACGCAGTAGT AGAAGACTGC GTAAACGCCG TTGGCGTCGA TCTCAACACT
GCTTCTGTTC CGCTGTTAAC CCGCGTGGCG GGCCTGACGC GCATGATGGC GCAAAACATC
GTTGCCTGGC GCGATGAGAA CGGTCAGTTC CAGAACCGTC AGCAACTGTT AAAAGTGAGC
CGTCTGGGGC CGAAAGCCTT CGAGCAGTGC GCGGGCTTCT TGCGCATTAA CCACGGTGAT
AACCCGCTGG ACGCGTCTAC CGTTCACCCG GAAGCCTATC CGGTGGTGGA ACGCATTCTG
GCAGCAACAC AGCAGGCACT GAAAGATCTG ATGGGTAACA GCAGCGAACT GCGTAACCTG
AAAGCGTCTG ACTTTACTGA TGAGAAATTC GGTGTGCCGA CGGTAACCGA CATCATCAAA
GAGCTGGAAA AACCGGGTCG CGATCCGCGT CCGGAATTTA AAACCGCTCA GTTTGCCGAT
GGCGTCGAGA CAATGAACGA CCTGCAACCG GGTATGATCC TCGAAGGCGC AGTGACCAAC
GTCACCAACT TTGGCGCGTT TGTCGATATT GGCGTGCATC AGGACGGCCT GGTTCACATC
TCTTCATTGT CGAACAAGTT TGTGGAAGAT CCGCATACCG TGGTGAAAGC GGGCGACATT
GTGAAGGTGA AAGTGCTGGA AGTGGATCTT CAGCGTAAAC GTATCGCCCT GACTATGCGC
CTGGATGAGC AGCCTGGCGA AACCAACGCT CGTCGCGGCG GCGGTAATGA ACGCCCGCAA
AACAACCGCC CGGCAGCCAA ACCACGCGGT CGTGAAGCGC AGCCTGCCGG TAATAGCGCG
ATGATGGATG CGCTGGCGGC GGCAATGGGC AAAAAACGTT AA
 
Protein sequence
MMNDSFCRII AGEIQARPEQ VDAAVRLLDE GNTVPFIARY RKEITGGLDD TQLRNLETRL 
SYLRELEERR QAILKSISEQ GKLTDDLAKA INATLSKTEL EDLYLPYKPK RRTRGQIAIE
AGLEPLADLL WSDPSHTPEV AAAQYVYADK GVADTKAALD GARYILMERF AEDAALLAKV
RDYLWKNAHL VSTVVSGKEE EGAKFRDYFD HHEPLSTVPS HRALAMFRGR NEGVLQLSLN
ADPQFDEPPK ESYCEQIIMD HLGLRLNNAP ADSWRKGVVS WTWRIKVLMH LETELMGTVR
ERAEDEAINV FARNLHDLLM AAPAGLRATM GLDPGLRTGV KVAVVDATGK LVATDTIYPH
TGQAAKAAMT VAALCEKHNV ELVAIGNGTA SRETERFYLD VQKQFPKVTA QKVIVSEAGA
SVYSASELAA QEFPDLDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVSQTQLA
RKLDAVVEDC VNAVGVDLNT ASVPLLTRVA GLTRMMAQNI VAWRDENGQF QNRQQLLKVS
RLGPKAFEQC AGFLRINHGD NPLDASTVHP EAYPVVERIL AATQQALKDL MGNSSELRNL
KASDFTDEKF GVPTVTDIIK ELEKPGRDPR PEFKTAQFAD GVETMNDLQP GMILEGAVTN
VTNFGAFVDI GVHQDGLVHI SSLSNKFVED PHTVVKAGDI VKVKVLEVDL QRKRIALTMR
LDEQPGETNA RRGGGNERPQ NNRPAAKPRG REAQPAGNSA MMDALAAAMG KKR