Gene EcDH1_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0290 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp322311 
End bp323141 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content54% 
IMG OID 
ProductRhomboid family protein 
Protein accessionACX37980 
Protein GI260447558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATGA TTACCTCTTT TGCTAACCCC CGCGTGGCGC AGGCGTTTGT TGATTACATG 
GCGACGCAGG GTGTTATCCT CACGATTCAA CAACATAACC AAAGCGATGT CTGGCTGGCG
GATGAGTCCC AGGCCGAGCG CGTACGGGCG GAGCTGGCGC GTTTTCTCGA AAACCCGGCA
GATCCGCGTT ATCTGGCGGC GAGCTGGCAG GCAGGCCATA CCGGCAGTGG CCTGCATTAT
CGCCGTTATC CTTTCTTTGC CGCCTTGCGT GAACGCGCAG GTCCGGTAAC CTGGGTGATG
ATGATCGCCT GCGTGGTGGT GTTTATTGCC ATGCAAATTC TCGGCGATCA GGAAGTGATG
TTATGGCTGG CCTGGCCATT CGATCCAACA CTGAAATTTG AGTTCTGGCG TTACTTCACC
CACGCGTTAA TGCACTTCTC GCTGATGCAT ATCCTCTTTA ACCTGCTCTG GTGGTGGTAT
CTCGGCGGTG CGGTGGAAAA ACGCCTCGGT AGCGGTAAGC TAATTGTCAT TACGCTTATC
AGCGCCCTGT TAAGCGGCTA TGTGCAGCAA AAATTCAGCG GGCCGTGGTT TGGCGGGCTT
TCTGGCGTGG TGTATGCGCT GATGGGCTAC GTCTGGCTAC GTGGCGAACG CGATCCGCAA
AGTGGCATTT ACCTGCAACG TGGGTTAATT ATCTTTGCGC TGATCTGGAT TGTCGCCGGA
TGGTTTGATT TGTTTGGGAT GTCGATGGCG AACGGAGCAC ACATCGCCGG GTTAGCCGTG
GGTTTAGCGA TGGCTTTTGT TGATTCGCTC AATGCGCGAA AACGAAAATA A
 
Protein sequence
MLMITSFANP RVAQAFVDYM ATQGVILTIQ QHNQSDVWLA DESQAERVRA ELARFLENPA 
DPRYLAASWQ AGHTGSGLHY RRYPFFAALR ERAGPVTWVM MIACVVVFIA MQILGDQEVM
LWLAWPFDPT LKFEFWRYFT HALMHFSLMH ILFNLLWWWY LGGAVEKRLG SGKLIVITLI
SALLSGYVQQ KFSGPWFGGL SGVVYALMGY VWLRGERDPQ SGIYLQRGLI IFALIWIVAG
WFDLFGMSMA NGAHIAGLAV GLAMAFVDSL NARKRK