Gene EcDH1_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0242 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp271997 
End bp273247 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content56% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionACX37933 
Protein GI260447511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT GTTGTAAAAA TGTGGTGATC CTCATGCCCG AACCCGTAGC CGAACCCGCG 
CTAAACGGAT TGCGCCTGAA TTTGCGCATT GTCTCTATAG TCATGTTTAA CTTCGCCAGC
TACCTCACCA TCGGGTTGCC GCTCGCTGTA TTACCGGGCT ATGTCCATGA TGTGATGGGC
TTTAGCGCCT TCTGGGCAGG ATTGGTTATC AGCCTGCAAT ATTTCGCCAC CTTGCTGAGC
CGCCCTCATG CCGGACGTTA CGCCGATTCG CTGGGACCCA AAAAGATTGT CGTCTTCGGT
TTATGCGGCT GCTTTTTGAG CGGTCTGGGG TATCTGACGG CAGGATTAAC CGCCAGTCTG
CCTGTCATCA GCCTGTTATT ACTTTGCCTG GGGCGCGTCA TCCTTGGGAT TGGGCAAAGT
TTTGCCGGAA CGGGATCGAC CCTATGGGGC GTTGGCGTGG TTGGCTCGCT GCATATCGGG
CGGGTGATTT CGTGGAACGG CATTGTCACT TACGGGGCGA TGGCGATGGG TGCGCCGTTA
GGCGTCGTGT TTTATCACTG GGGCGGCTTG CAGGCGTTAG CGTTAATCAT TATGGGCGTG
GCGCTGGTGG CCATTTTGTT GGCGATCCCG CGTCCGACGG TAAAAGCCAG TAAAGGCAAA
CCGCTGCCGT TTCGCGCGGT GCTTGGGCGC GTCTGGCTGT ACGGTATGGC GCTGGCACTG
GCTTCCGCCG GATTTGGCGT CATCGCCACC TTTATCACGC TGTTTTATGA CGCTAAAGGT
TGGGACGGTG CGGCTTTCGC GCTGACGCTG TTTAGCTGTG CGTTTGTCGG TACGCGTTTG
TTATTCCCTA ACGGCATTAA CCGTATCGGT GGCTTAAACG TAGCGATGAT TTGCTTTAGC
GTTGAGATAA TCGGCCTGCT ACTGGTTGGC GTGGCGACTA TGCCGTGGAT GGCGAAAATC
GGCGTCTTAC TGGCGGGGGC CGGGTTTTCG CTGGTGTTCC CGGCATTGGG TGTAGTGGCG
GTAAAAGCGG TTCCGCAGCA AAATCAGGGG GCGGCGCTGG CAACTTACAC CGTATTTATG
GATTTATCGC TTGGCGTGAC TGGACCACTG GCTGGGCTGG TGATGAGCTG GGCGGGCGTA
CCGGTGATTT ATCTGGCGGC GGCGGGACTG GTCGCAATCG CGTTATTACT GACGTGGCGA
TTAAAAAAAC GGCCTCCGGA ACACGTCCCT GAGGCCGCCT CATCATCTTA A
 
Protein sequence
MKHCCKNVVI LMPEPVAEPA LNGLRLNLRI VSIVMFNFAS YLTIGLPLAV LPGYVHDVMG 
FSAFWAGLVI SLQYFATLLS RPHAGRYADS LGPKKIVVFG LCGCFLSGLG YLTAGLTASL
PVISLLLLCL GRVILGIGQS FAGTGSTLWG VGVVGSLHIG RVISWNGIVT YGAMAMGAPL
GVVFYHWGGL QALALIIMGV ALVAILLAIP RPTVKASKGK PLPFRAVLGR VWLYGMALAL
ASAGFGVIAT FITLFYDAKG WDGAAFALTL FSCAFVGTRL LFPNGINRIG GLNVAMICFS
VEIIGLLLVG VATMPWMAKI GVLLAGAGFS LVFPALGVVA VKAVPQQNQG AALATYTVFM
DLSLGVTGPL AGLVMSWAGV PVIYLAAAGL VAIALLLTWR LKKRPPEHVP EAASSS