Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0239 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 268522 |
End bp | 270096 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | nickel ABC transporter, periplasmic nickel-binding protein |
Protein accession | ACX37930 |
Protein GI | 260447508 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCCA CACTCCGCCG CACTCTATTT GCGCTGCTGG CTTGTGCGTC TTTTATCGTC CATGCCGCTG CACCAGATGA AATCACCACC GCCTGGCCGG TGAATGTCGG GCCACTAAAC CCGCACCTTT ACACGCCTAA CCAGATGTTC GCCCAGAGCA TGGTTTATGA ACCATTGGTG AAATATCAGG CAGACGGTTC GGTGATCCCG TGGCTGGCAA AAAGCTGGAC TCATTCAGAA GATGGTAAAA CCTGGACCTT CACCCTGCGT GATGACGTGA AATTCTCCAA CGGTGAACCG TTCGATGCCG AGGCGGCGGC AGAAAACTTC CGCGCAGTGC TCGATAACCG TCAACGTCAC GCCTGGCTGG AGCTGGCAAA CCAGATTGTT GATGTTAAAG CACTCAGTAA AACAGAGCTG CAAATTACCC TGAAAAGCGC CTACTATCCT TTCCTGCAAG AACTGGCCCT GCCCCGTCCT TTCCGTTTTA TCGCTCCCTC GCAGTTTAAA AACCATGAAA CCATGAACGG AATTAAAGCG CCGATTGGCA CCGGACCGTG GATTTTGCAG GAATCGAAAC TGAATCAGTA CGATGTCTTC GTCCGTAACG AAAACTACTG GGGCGAAAAG CCAGCGATTA AAAAGATCAC CTTTAACGTC ATCCCGGACC CGACTACCCG CGCGGTGGCG TTTGAAACTG GCGATATCGA CCTGCTGTAC GGAAACGAAG GGTTATTACC GCTCGATACC TTCGCCCGCT TTAGCCAGAA TCCGGCTTAC CACACCCAAC TGTCACAGCC GATCGAAACC GTGATGCTGG CGCTCAATAC CGCCAAAGCC CCCACCAACG AGCTGGCAGT ACGTGAAGCT CTTAATTACG CGGTAAACAA AAAATCGCTG ATTGATAACG CGTTGTATGG CACCCAGCAG GTCGCCGACA CCCTGTTTGC CCCTTCTGTG CCCTACGCCA ACCTCGGCCT GAAACCGAGC CAGTACGATC CGCAAAAAGC GAAAGCGTTG CTGGAAAAAG CCGGTTGGAC GCTGCCTGCG GGCAAAGACA TCCGCGAGAA AAATGGTCAG CCGCTGCGCA TTGAACTTTC GTTCATCGGC ACCGATGCGT TAAGCAAATC GATGGCGGAA ATCATTCAGG CTGATATGCG CCAGATTGGC GCAGATGTCT CGCTGATTGG CGAAGAAGAG AGCAGTATCT ATGCTCGTCA GCGCGACGGT CGTTTTGGCA TGATTTTCCA CCGCACCTGG GGCGCGCCAT ATGATCCACA CGCCTTCCTC AGTTCAATGC GCGTACCGTC ACACGCTGAC TTCCAGGCAC AGCAAGGATT AGCCGACAAA CCGCTGATTG ATAAAGAGAT CGGCGAAGTG CTGGCGACCC ATGACGAAAC GCAACGTCAG GCGCTGTATC GCGACATTCT GACCCGTCTG CATGACGAGG CGGTTTATCT GCCTATCAGT TACATCTCAA TGATGGTGGT ATCAAAACCG GAGCTGGGTA ACATCCCCTA CGCGCCGATC GCCACCGAAA TTCCGTTCGA ACAGATTAAA CCGGTGAAAC CTTAA
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Protein sequence | MLSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF AQSMVYEPLV KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP FDAEAAAENF RAVLDNRQRH AWLELANQIV DVKALSKTEL QITLKSAYYP FLQELALPRP FRFIAPSQFK NHETMNGIKA PIGTGPWILQ ESKLNQYDVF VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY GNEGLLPLDT FARFSQNPAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL IDNALYGTQQ VADTLFAPSV PYANLGLKPS QYDPQKAKAL LEKAGWTLPA GKDIREKNGQ PLRIELSFIG TDALSKSMAE IIQADMRQIG ADVSLIGEEE SSIYARQRDG RFGMIFHRTW GAPYDPHAFL SSMRVPSHAD FQAQQGLADK PLIDKEIGEV LATHDETQRQ ALYRDILTRL HDEAVYLPIS YISMMVVSKP ELGNIPYAPI ATEIPFEQIK PVKP
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