Gene EcDH1_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0237 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp266748 
End bp267581 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID 
Productnickel ABC transporter, permease subunit NikC 
Protein accessionACX37928 
Protein GI260447506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTTTT TCCTCTCTTC CCGCTGGTCG GTACGCCTGG CGCTGATCAT TATCGCCCTG 
CTGGCGCTGA TTGCGCTCAC CAGCCAGTGG TGGCTGCCGT ATGACCCACA GGCGATTGAT
TTGCCGTCGC GCCTGCTTTC GCCGGATGCG CAGCACTGGC TGGGCACCGA TCACTTAGGT
CGCGATATTT TCTCGCGGCT GATGGCAGCG ACCCGCGTGT CGCTCGGTTC GGTAATGGCC
TGCCTGCTGC TGGTGCTGAC ATTAGGGCTG GTTATTGGCG GCAGCGCCGG GTTGATTGGC
GGGCGCGTTG ATCAGGCCAC CATGCGCGTC GCCGATATGT TTATGACCTT CCCGACCTCG
ATTCTGTCGT TCTTTATGGT TGGCGTGCTC GGCACCGGGC TGACCAACGT AATTATCGCC
ATCGCCCTGT CGCACTGGGC GTGGTATGCA CGCATGGTGC GCAGCCTGGT GATTTCACTA
CGCCAACGCG AGTTTGTGCT GGCGTCACGG CTTTCCGGTG CGGGCCATGT GCGGGTGTTT
GTCGATCATC TGGCAGGCGC GGTGATCCCT TCGCTGCTGG TGCTGGCAAC GCTGGATATC
GGCCATATGA TGCTGCACGT CGCGGGGATG TCTTTCCTTG GCCTCGGTGT GACCGCGCCG
ACCGCCGAAT GGGGCGTGAT GATTAACGAC GCGCGCCAGT ATATCTGGAC CCAGCCGCTG
CAAATGTTCT GGCCGGGGCT GGCGCTGTTT ATCAGCGTGA TGGCCTTTAA CCTGGTGGGT
GACGCACTGC GCGATCATCT GGACCCTCAT CTGGTGACGG AGCACGCACA CTAA
 
Protein sequence
MNFFLSSRWS VRLALIIIAL LALIALTSQW WLPYDPQAID LPSRLLSPDA QHWLGTDHLG 
RDIFSRLMAA TRVSLGSVMA CLLLVLTLGL VIGGSAGLIG GRVDQATMRV ADMFMTFPTS
ILSFFMVGVL GTGLTNVIIA IALSHWAWYA RMVRSLVISL RQREFVLASR LSGAGHVRVF
VDHLAGAVIP SLLVLATLDI GHMMLHVAGM SFLGLGVTAP TAEWGVMIND ARQYIWTQPL
QMFWPGLALF ISVMAFNLVG DALRDHLDPH LVTEHAH