Gene EcDH1_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0235 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp265181 
End bp265987 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID 
Productnickel import ATP-binding protein NikE 
Protein accessionACX37926 
Protein GI260447504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAC TTAACATCTC CGGCCTTTCC CATCACTATG CGCACGGTGG ATTTAACGGA 
AAACATCAAC ATCAGGCGGT GCTGAATAAC GTTTCCCTGA CCCTGAAAAG CGGCGAAACC
GTCGCCCTGC TGGGGCGCAG CGGCTGCGGG AAAAGTACCC TCGCGCGGTT GCTGGTGGGT
TTAGAATCGC CCGCGCAGGG GAATATTAGC TGGCGTGGCG AACCGCTGGC GAAACTCAAT
CGCGCCCAGC GTAAAGCGTT CCGCCGCGAT ATTCAGATGG TATTTCAGGA CTCCATCAGC
GCCGTGAATC CGCGCAAAAC CGTGCGCGAG ATCCTGCGTG AACCGATGCG CCACCTGCTA
TCACTGAAAA AATCCGAACA ACTGGCGCGC GCCAGCGAAA TGCTGAAGGC GGTCGATCTC
GATGACAGCG TTCTCGACAA ACGCCCACCG CAGTTAAGCG GCGGCCAGCT CCAGCGCGTC
TGCCTGGCTC GCGCGCTGGC GGTCGAACCG AAACTACTGA TTCTGGATGA AGCCGTTTCT
AACCTTGATC TCGTGTTACA GGCGGGTGTC ATTCGCCTGC TGAAAAAGCT ACAACAACAG
TTTGGCACCG CCTGCCTGTT CATCACCCAC GACTTACGCC TGGTAGAACG CTTTTGCCAG
CGGGTAATGG TTATGGACAA CGGACAAATC GTCGAAACCC AGGTGGTGGG AGAGAAATTA
ACCTTTTCCT CTGACGCCGG ACGTGTGCTA CAAAACGCGG TATTACCCGC ATTCCCCGTG
CGCCGTCGCA CCACAGAAAA GGTTTAA
 
Protein sequence
MTLLNISGLS HHYAHGGFNG KHQHQAVLNN VSLTLKSGET VALLGRSGCG KSTLARLLVG 
LESPAQGNIS WRGEPLAKLN RAQRKAFRRD IQMVFQDSIS AVNPRKTVRE ILREPMRHLL
SLKKSEQLAR ASEMLKAVDL DDSVLDKRPP QLSGGQLQRV CLARALAVEP KLLILDEAVS
NLDLVLQAGV IRLLKKLQQQ FGTACLFITH DLRLVERFCQ RVMVMDNGQI VETQVVGEKL
TFSSDAGRVL QNAVLPAFPV RRRTTEKV