Gene EcDH1_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0230 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp258249 
End bp259385 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content42% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionACX37922 
Protein GI260447500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAACCTGG 
AAAGTGGAAC ATAAATTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCTGGT
GCAGAAGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA
TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT
ATCAGTCCTG CAAAATTTCA CGAGTGCTTT ATTAACTGGA TGCGTGACTG CCATTCTTCA
GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCACTCTTA TGACAAGAGT
CGCCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC
GGACAGATCA AGACGGATGA GAAATCTAAT GAGATTACAG CTATCCCAGA ACTTCTTAAC
ATGCTGGATA TTAAAGGAAA AATCATCACA ACTGATGCGA TGGGTTGCCA GAAAGATATT
GCAGAGAAGA TACAAAAACA GGGAGGTGAT TATTTATTCG CGGTAAAAGG AACCCAGGGG
CGGCTAAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT
GACAGTTACG CAATCAGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTCT TCATATTGTT
TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGGCT GAAGAAATTA
TGCGTGGCAG TCTCCTTTCG GTCCATAATA GCAGAACAAA AGAAAGAGCC AGAAATGACG
GTCAGATATT ATATCAGTTC TGCTGATTTA ACCGCTGAGA AATTCGCCAC AGCGATCCGA
AATCACTGGC ACGTGGAGAA TAAGCTGCAC TGGCGTCTGG ACGTGGTAAT GAATGAAGAC
GACTGCAAAA TAAGAAGAGG AAATGCAGCA GAATTATTTT CAGGGATACG GCACATTGCT
ATTAATATTT TGACGAATGA TAAGGTATTC AAGGCAGGGT TAAGACGTAA GATGCGAAAA
GCAGCCATGG ACAGAAACTA TCTGGCGTCA GTCCTTGCGG GGAGCGGGCT TTCGTAA
 
Protein sequence
MELKKLMEHI SIIPDYRQTW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHLDFLKQ 
YGDFENGIPV HDTIARVVSC ISPAKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS
RRRGAIHVIS AFSTMHSLVI GQIKTDEKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI
AEKIQKQGGD YLFAVKGTQG RLNKAFEEKF PLKELNNPEH DSYAISEKSH GREEIRLHIV
CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKEPEMT VRYYISSADL TAEKFATAIR
NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMRK
AAMDRNYLAS VLAGSGLS