Gene EcDH1_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0223 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp246353 
End bp247555 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID 
ProductHI0933 family protein 
Protein accessionACX37916 
Protein GI260447494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAGGT TTGATGCCAT TATTATAGGC GCTGGTGCGG CGGGTATGTT CTGTTCTGCG 
CTGGCAGGTC AGGCAGGACG CCGGGTTCTG CTGATCGATA ATGGTAAAAA ACCAGGGCGC
AAAATCCTTA TGTCTGGCGG TGGGCGCTGC AACTTTACCA ACCTTTATGT CGAACCAGGC
GCTTATCTGA GCCAGAATCC GCATTTTTGT AAGTCTGCAC TCGCACGTTT TACCCAGTGG
GATTTCATTG ATCTGGTCAA TAAACACGGC ATCGCCTGGC ACGAGAAAAC GTTAGGGCAA
CTCTTCTGCG ATGACTCCGC GCAGCAGATT GTCGACATGC TGGTGGATGA GTGCGAGAAG
GGCAATGTGA CCTTCAGATT GCGTAGCGAA GTGCTGAGTG TGGCGAAGGA TGAAACAGGC
TTCACGCTTG ATCTGAACGG CATGACTGTC GGTTGCGAAA AGCTGGTCAT CGCGACTGGT
GGGCTGTCAA TGCCGGGGCT GGGCGCGTCG CCGTTTGGTT ATAAGATTGC CGAACAATTT
GGCCTCAACG TGCTGCCGAC CCGCGCGGGT CTGGTGCCAT TCACTCTGCA TAAACCGTTG
CTCGAAGAGT TACAGGTGCT GGCGGGCGTG GCGGTGCCTT CCGTGATTAC CGCTGAAAAC
GGCACCGTTT TCCGTGAGAA CTTACTCTTC ACCCACCGCG GCTTGTCTGG ACCGGCGGTG
TTGCAGATTT CAAGCTACTG GCAACCGGGG GAATTTGTCA GCATCAATCT GCTACCGGAT
GTGGACCTCG AAACCTTCCT GAATGAGCAG CGTAACGCAC ATCCGAATCA AAGCCTGAAA
AACACACTGG CGGTTCATCT ACCGAAGCGG TTGGTTGAAC GCTTACAGCA ACTCGGGCAA
ATCCCGGATG TTTCGCTAAA ACAGCTCAAC GTGCGTGACC AACAGGCACT GATTAGCACA
TTGACCGACT GGCGCGTACA ACCCAACGGC ACTGAAGGCT ATCGCACTGC CGAAGTGACG
CTCGGCGGCG TGGACACCAA CGAACTCTCT TCACGGACGA TGGAAGCGCG CAAAGTGCCT
GGGCTGTACT TCATCGGCGA AGTGATGGAC GTCACCGGCT GGCTGGGGGG CTATAACTTC
CAGTGGGCGT GGTCGAGTGC GTGGGCTTGT GCGCAGGATT TGATTGCAGC AAAGTCGTCC
TGA
 
Protein sequence
MERFDAIIIG AGAAGMFCSA LAGQAGRRVL LIDNGKKPGR KILMSGGGRC NFTNLYVEPG 
AYLSQNPHFC KSALARFTQW DFIDLVNKHG IAWHEKTLGQ LFCDDSAQQI VDMLVDECEK
GNVTFRLRSE VLSVAKDETG FTLDLNGMTV GCEKLVIATG GLSMPGLGAS PFGYKIAEQF
GLNVLPTRAG LVPFTLHKPL LEELQVLAGV AVPSVITAEN GTVFRENLLF THRGLSGPAV
LQISSYWQPG EFVSINLLPD VDLETFLNEQ RNAHPNQSLK NTLAVHLPKR LVERLQQLGQ
IPDVSLKQLN VRDQQALIST LTDWRVQPNG TEGYRTAEVT LGGVDTNELS SRTMEARKVP
GLYFIGEVMD VTGWLGGYNF QWAWSSAWAC AQDLIAAKSS