Gene EcDH1_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0220 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp243218 
End bp243652 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID 
ProductUspA domain protein 
Protein accessionACX37913 
Protein GI260447491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTATA AACACATTCT CATCGCGGTC GACCTCTCCC CGGAAAGCAA AGTTCTGGTA 
GAGAAAGCAG TCTCTATGGC TCGCCCCTAC AATGCGAAAG TTTCTCTGAT CCACGTAGAT
GTAAACTACT CTGACCTATA CACCGGGCTT ATTGATGTGA ATCTGGGTGA TATGCAGAAA
CGCATCTCTG AAGAGACACA TCATGCACTG ACCGAGCTTT CCACTAATGC AGGCTACCCA
ATCACTGAAA CCCTGAGCGG CAGCGGCGAC CTGGGCCAGG TTCTGGTCGA TGCAATCAAG
AAATACGATA TGGATTTGGT GGTTTGTGGT CACCACCAGG ACTTCTGGAG CAAACTGATG
TCTTCCGCAC GTCAGCTGAT CAACACCGTT CACGTTGATA TGCTGATTGT TCCGCTGCGC
GACGAAGAAG AATAA
 
Protein sequence
MAYKHILIAV DLSPESKVLV EKAVSMARPY NAKVSLIHVD VNYSDLYTGL IDVNLGDMQK 
RISEETHHAL TELSTNAGYP ITETLSGSGD LGQVLVDAIK KYDMDLVVCG HHQDFWSKLM
SSARQLINTV HVDMLIVPLR DEEE