Gene EcDH1_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0197 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp217953 
End bp218777 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content41% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionACX37891 
Protein GI260447469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAC TACATGGGAA TTGTCTAATT GCGTATGCAA GACATAAATA TATTCTCACC 
ATGGTTAATG GTGAATATCG CTATTTTAAT GGCGGTGACC TGGTTTTTGC GGATGCAAGC
CAAATTCGAG TAGATAAGTG TGTTGAAAAT TTTGTATTCG TGTCAAGGGA CACGCTTTCA
TTATTTCTCC CGATGCTCAA GGAGGAGGCA TTAAATCTTC ATGCACATAA AAAAGTTTCT
TCATTACTCG TTCATCACTG TAGTAGAGAT ATTCCTGTTT TTCAGGAAGT TGCGCAACTA
TCGCAGAATA AGAATCTTCG CTATGCAGAA ATGCTACGTA AAAGAGCATT AATCTTTGCG
TTGTTATCTG TTTTTCTTGA GGATGAGCAC TTTATACCGC TGCTTCTGAA CGTTTTACAA
CCGAACATGC GAACACGAGT TTGTACGGTT ATCAATAATA ATATCGCCCA TGAGTGGACA
CTAGCCCGAA TCGCCAGCGA GCTGTTGATG AGTCCAAGTC TGTTAAAGAA AAAATTGCGC
GAAGAAGAGA CATCATATTC ACAGTTGCTT ACTGAGTGTA GAATGCAACG TGCTTTGCAA
CTTATTGTTA TACATGGTTT TTCAATTAAG CGAGTTGCAG TATCCTGTGG ATATCACAGC
GTGTCGTATT TCATTTACGT CTTTCGAAAT TATTATGGGA TGACGCCCAC AGAGTATCAG
GAGCGATCGG CGCAGAGATT GTCGAACCGT GACTCGGCGG CAAGTATTGT TGCGCAAGGG
AATTTTTACG GCACTGACCG TTCTGCGGAA GGAATAAGAT TATAG
 
Protein sequence
MQSLHGNCLI AYARHKYILT MVNGEYRYFN GGDLVFADAS QIRVDKCVEN FVFVSRDTLS 
LFLPMLKEEA LNLHAHKKVS SLLVHHCSRD IPVFQEVAQL SQNKNLRYAE MLRKRALIFA
LLSVFLEDEH FIPLLLNVLQ PNMRTRVCTV INNNIAHEWT LARIASELLM SPSLLKKKLR
EEETSYSQLL TECRMQRALQ LIVIHGFSIK RVAVSCGYHS VSYFIYVFRN YYGMTPTEYQ
ERSAQRLSNR DSAASIVAQG NFYGTDRSAE GIRL