Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0184 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 198184 |
End bp | 200133 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
Protein accession | ACX37878 |
Protein GI | 260447456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCAG CCGTTGTCCT GGTGTTCGTT TTTATTTTTT GCACCGTTTT GCTGTTCCAT CTGGTCCAGC AGAATCGCTA TAACACGGCT ACGCAACTGG AAAGCATTGC TCGCTCTGTC CGCGAACCCT TATCTTCAGC TATTTTGAAA GGCGATATTC CCGAAGCGGA AGCTATTCTT GCCAGCATTA AACCGGCAGG CGTGGTCAGC CGTGCCGATG TAGTGCTGCC TAACCAGTTC CAGGCGCTGC GTAAAAGTTT TATTCCAGAG CGCCCGGTGC CGGTAATGGT TACTCGCCTG TTTGAGCTAC CGGTTCAAAT CTCGCTGGGC GTTTACTCGC TCGAACGTCC GGCAAACCCG CAGCCAATTG CCTATCTGGT ACTACAGGCG GATTCCTTCC GTATGTATAA GTTCGTGATG AGCACCCTCT CAACGTTAGT GACCATTTAC TTACTTTTGT CGCTTATCCT GACCGTCGCC ATCAGCTGGT GCATTAACCG CCTGATTTTG CATCCGTTAC GCAATATTGC TCGCGAACTT AACGCCATCC CAGCCAAGGA GCTTGTTGGT CACCAACTGG CATTACCGCG TCTGCATCAG GACGATGAAA TCGGTATGTT GGTGCGCAGT TACAACCTCA ACCAGCAATT GCTGCAGCGC CATTATGAAG AACAGAACGA AAATGCGATG CGCTTCCCGG TGTCGGATTT GCCGAACAAA GCCTTGCTGA TGGAGATGCT GGAGCAGGTT GTCGCGCGTA AACAAACCAC CGCGCTGATG ATCATCACCT GTGAAACCCT GCGTGATACT GCGGGCGTGC TGAAAGAGGC GCAACGAGAA ATTCTGCTGC TGACGCTGGT GGAAAAACTC AAATCGGTAC TGTCGCCACG TATGATCCTC GCGCAGATTA GCGGTTATGA CTTTGCTGTC ATTGCCAACG GTGTACAGGA ACCGTGGCAC GCAATCACCT TAGGTCAGCA AGTGCTCACT ATCATGAGCG AGCGCCTGCC GATTGAACGT ATTCAACTCC GTCCGCACTG TAGCATTGGC GTGGCGATGT TCTACGGCGA TCTCACCGCC GAACAGCTTT ACAGTCGCGC TATTTCTGCG GCATTTACCG CTCGCCATAA AGGCAAGAAT CAGATTCAGT TCTTTGATCC GCAGCAGATG GAAGCCGCCC AGAAGCGGTT GACGGAAGAG AGCGATATCC TTAATGCACT GGAAAATCAT CAGTTTGCTA TTTGGTTACA GCCACAGGTC GAGATGACCA GCGGTAAACT GGTCAGTGCG GAAGTGTTAC TGCGTATCCA GCAACCGGAT GGCAGTTGGG ACCTGCCGGA TGGCTTAATC GATCGCATTG AGTGCTGTGG GCTGATGGTT ACCGTCGGTC ACTGGGTGCT GGAAGAGTCC TGTCGATTGC TTGCAGCCTG GCAAGAGCGC GGCATTATGC TGCCCTTGTC GGTAAACCTC TCTGCGCTGC AACTGATGCA CCCGAATATG GTGGCGGATA TGCTGGAACT GTTAACCCGC TATCGCATTC AGCCGGGAAC ACTGATTCTG GAAGTGACAG AAAGCCGACG TATTGACGAC CCTCATGCTG CGGTGGCAAT CCTCCGTCCG CTGCGCAATG CCGGAGTTCG GGTGGCGCTG GATGATTTCG GCATGGGCTA CGCAGGGCTG CGTCAGCTGC AGCATATGAA ATCGTTGCCA ATCGACGTAC TGAAAATCGA CAAAATGTTT GTTGAAGGCT TGCCGGGAGA TAGCAGCATG ATTGCTGCAA TTATCATGCT GGCGCAGAGC CTGAACTTAC AAATGATTGC CGAAGGCGTG GAGACTGAAG CACAACGCGA CTGGCTGGCA AAAGCGGGCG TTGGTATTGC CCAGGGCTTC CTTTTTGCTC GCCCACTCCC TATTGAAATC TTCGAAGAGA GTTACCTGGA AGAAAAGTAG
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Protein sequence | MVAAVVLVFV FIFCTVLLFH LVQQNRYNTA TQLESIARSV REPLSSAILK GDIPEAEAIL ASIKPAGVVS RADVVLPNQF QALRKSFIPE RPVPVMVTRL FELPVQISLG VYSLERPANP QPIAYLVLQA DSFRMYKFVM STLSTLVTIY LLLSLILTVA ISWCINRLIL HPLRNIAREL NAIPAKELVG HQLALPRLHQ DDEIGMLVRS YNLNQQLLQR HYEEQNENAM RFPVSDLPNK ALLMEMLEQV VARKQTTALM IITCETLRDT AGVLKEAQRE ILLLTLVEKL KSVLSPRMIL AQISGYDFAV IANGVQEPWH AITLGQQVLT IMSERLPIER IQLRPHCSIG VAMFYGDLTA EQLYSRAISA AFTARHKGKN QIQFFDPQQM EAAQKRLTEE SDILNALENH QFAIWLQPQV EMTSGKLVSA EVLLRIQQPD GSWDLPDGLI DRIECCGLMV TVGHWVLEES CRLLAAWQER GIMLPLSVNL SALQLMHPNM VADMLELLTR YRIQPGTLIL EVTESRRIDD PHAAVAILRP LRNAGVRVAL DDFGMGYAGL RQLQHMKSLP IDVLKIDKMF VEGLPGDSSM IAAIIMLAQS LNLQMIAEGV ETEAQRDWLA KAGVGIAQGF LFARPLPIEI FEESYLEEK
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