Gene EcDH1_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0172 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp180895 
End bp181899 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionACX37866 
Protein GI260447444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC AAGAGGCCAC CCTGCAACAA CCGCTGTTGC AGGCTATCGA CCTGAAAAAA 
CATTATCCGG TGAAGAAAGG CATGTTCGCG CCGGAACGTC TGGTTAAAGC GCTGGATGGC
GTTTCGTTTA ACCTTGAACG TGGCAAAACG CTGGCAGTAG TGGGCGAATC TGGCTGCGGT
AAATCGACCC TCGGTCGGTT GCTGACGATG ATTGAAATGC CCACCGGTGG CGAGCTGTAT
TACCAGGGGC AGGATCTGCT TAAGCACGAT CCGCAGGCGC AGAAGCTGCG TCGGCAGAAA
ATCCAGATCG TCTTCCAGAA CCCTTACGGT TCGCTGAATC CGCGTAAAAA AGTCGGGCAA
ATTCTTGAAG AGCCGCTGCT GATCAACACC AGCTTAAGCA AAGAACAGCG TCGGGAAAAA
GCCCTGTCGA TGATGGCGAA AGTCGGCCTG AAAACCGAGC ACTATGACCG CTATCCGCAT
ATGTTCTCCG GCGGTCAGCG TCAGCGTATC GCCATCGCCC GTGGTCTGAT GCTCGACCCG
GATGTGGTGA TTGCCGATGA ACCGGTTTCC GCGCTGGATG TTTCAGTGCG CGCGCAGGTG
CTGAATCTGA TGATGGATTT GCAGCAGGAG TTGGGGCTGT CTTATGTCTT TATCTCCCAC
GACCTGTCGG TGGTGGAGCA CATTGCTGAT GAAGTGATGG TGATGTACCT GGGCCGCTGC
GTGGAGAAGG GAACGAAAGA CCAAATCTTC AATAACCCGC GCCATCCGTA CACTCAGGCG
CTACTTTCCG CGACGCCGCG CCTGAACCCG GACGATCGCC GCGAGCGCAT CAAGCTCAGC
GGTGAACTAC CAAGCCCACT GAATCCACCG CCGGGTTGCG CCTTCAACGC CCGCTGTCGT
CGGCGCTTCG GCCCCTGCAC CCAGTTGCAG CCGCAGCTAA AAGACTACGG CGGTCAACTG
GTAGCTTGTT TTGCTGTTGA TCAGGATGAA AATCCGCAGC GTTAA
 
Protein sequence
MSTQEATLQQ PLLQAIDLKK HYPVKKGMFA PERLVKALDG VSFNLERGKT LAVVGESGCG 
KSTLGRLLTM IEMPTGGELY YQGQDLLKHD PQAQKLRRQK IQIVFQNPYG SLNPRKKVGQ
ILEEPLLINT SLSKEQRREK ALSMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP
DVVIADEPVS ALDVSVRAQV LNLMMDLQQE LGLSYVFISH DLSVVEHIAD EVMVMYLGRC
VEKGTKDQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLS GELPSPLNPP PGCAFNARCR
RRFGPCTQLQ PQLKDYGGQL VACFAVDQDE NPQR