| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0171 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 179915 |
|---|
| End bp | 180898 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | ACX37865 |
|---|
| Protein GI | 260447443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTAT TAAATGTAGA TAAATTATCG GTGCATTTCG GCGACGAAAG CGCGCCGTTC
CGCGCCGTAG ACCGCATCAG CTACAGCGTA AAACAGGGCG AAGTGGTCGG GATTGTGGGT
GAGTCCGGCT CCGGTAAGTC GGTCAGTTCA CTGGCGATTA TGGGGCTGAT TGATTATCCG
GGCCGCGTAA TGGCAGAAAA ACTGGAGTTT AACGGCCAGG ATTTGCAGCG TATCTCAGAA
AAAGAGCGCC GCAACCTGGT GGGTGCCGAA GTGGCGATGA TCTTCCAGGA CCCGATGACC
AGCCTTAACC CGTGCTACAC CGTGGGTTTC CAGATTATGG AAGCGATTAA GGTGCATCAG
GGCGGCAACA AAAGTACCCG CCGTCAGCGA GCGATTGACC TGCTGAATCA GGTCGGTATT
CCCGATCCGG CATCGCGTCT GGATGTTTAC CCGCATCAGC TTTCCGGCGG CATGAGCCAG
CGCGTGATGA TCGCCATGGC GATTGCCTGT CGGCCAAAAC TGCTGATTGC CGATGAACCG
ACCACCGCGC TGGACGTGAC CATTCAGGCG CAAATCATCG AACTACTGCT GGAGCTACAG
CAGAAAGAGA ACATGGCGCT GGTGTTAATT ACCCATGACC TGGCGCTGGT GGCGGAAGCG
GCACATAAAA TCATCGTGAT GTATGCAGGC CAGGTGGTGG AAACCGGTGA TGCGCACGCC
ATCTTCCATG CGCCGCGTCA CCCGTATACT CAGGCATTGC TGCGTGCGCT GCCAGAATTT
GCTCAGGACA AAGAACGTCT GGCGTCGTTG CCAGGTGTCG TTCCCGGCAA GTACGACCGC
CCGAACGGCT GCCTGCTTAA CCCGCGCTGC CCCTATGCCA CTGACAGATG TCGCGCTGAA
GAACCGGCGC TGAATATGCT CGCTGACGGG CGTCAGTCCA AATGCCATTA CCCACTTGAT
GATGCCGGGA GGCCGACACT ATGA
|
|---|
| Protein sequence | MALLNVDKLS VHFGDESAPF RAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP
GRVMAEKLEF NGQDLQRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ
GGNKSTRRQR AIDLLNQVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP
TTALDVTIQA QIIELLLELQ QKENMALVLI THDLALVAEA AHKIIVMYAG QVVETGDAHA
IFHAPRHPYT QALLRALPEF AQDKERLASL PGVVPGKYDR PNGCLLNPRC PYATDRCRAE
EPALNMLADG RQSKCHYPLD DAGRPTL
|
|---|
| |