Gene EcDH1_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0143 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp150021 
End bp151562 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content47% 
IMG OID 
ProductD-xylose ABC transporter, ATPase subunit 
Protein accessionACX37837 
Protein GI260447415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTATC TACTTGAAAT GAAGAACATT ACCAAAACCT TCGGCAGTGT GAAGGCGATT 
GATAACGTCT GCTTGCGGTT GAATGCTGGC GAAATCGTCT CACTTTGTGG GGAAAATGGG
TCTGGTAAAT CAACGCTGAT GAAAGTGCTG TGTGGTATTT ATCCCCATGG CTCCTACGAA
GGCGAAATTA TTTTTGCGGG AGAAGAGATT CAGGCGAGTC ACATCCGCGA TACCGAACGC
AAAGGTATCG CCATCATTCA TCAGGAATTG GCCCTGGTGA AAGAATTGAC CGTGCTGGAA
AATATCTTCC TGGGTAACGA AATAACCCAC AATGGCATTA TGGATTATGA CCTGATGACG
CTACGCTGTC AGAAGCTGCT CGCACAGGTC AGTTTATCCA TTTCACCTGA TACCCGCGTT
GGCGATTTAG GGCTTGGGCA ACAACAACTG GTTGAAATTG CCAAGGCACT TAATAAACAG
GTGCGCTTGT TAATTCTCGA TGAACCGACA GCCTCATTAA CTGAGCAGGA AACGTCGATT
TTACTGGATA TTATTCGCGA TCTACAACAG CACGGTATCG CCTGTATTTA TATTTCGCAC
AAACTCAACG AAGTCAAAGC GATTTCCGAT ACGATTTGCG TTATTCGCGA CGGACAGCAC
ATTGGTACGC GTGATGCTGC CGGAATGAGT GAAGACGATA TTATCACCAT GATGGTCGGG
CGAGAGTTAA CCGCGCTTTA CCCTAATGAA CCACATACCA CCGGAGATGA AATATTACGT
ATTGAACATC TGACGGCATG GCATCCGGTT AATCGTCATA TTAAACGAGT TAATGATGTC
TCGTTTTCCC TGAAACGTGG CGAAATATTG GGTATTGCCG GACTCGTTGG TGCCGGACGT
ACCGAGACCA TTCAGTGCCT GTTTGGTGTG TGGCCCGGAC AATGGGAAGG AAAAATTTAT
ATTGATGGCA AACAGGTAGA TATTCGTAAC TGTCAGCAAG CCATCGCCCA GGGGATTGCG
ATGGTCCCCG AAGACAGAAA GCGCGACGGC ATCGTTCCGG TAATGGCGGT TGGTAAAAAT
ATTACCCTCG CCGCACTCAA TAAATTTACC GGTGGCATTA GCCAGCTTGA TGACGCGGCA
GAGCAAAAAT GTATTCTGGA ATCAATCCAG CAACTCAAAG TTAAAACGTC GTCCCCCGAC
CTTGCTATTG GACGTTTGAG CGGCGGCAAT CAGCAAAAAG CGATCCTCGC TCGCTGTCTG
TTACTTAACC CGCGCATTCT CATTCTTGAT GAACCCACCA GGGGTATCGA TATTGGCGCG
AAATACGAGA TCTACAAATT AATTAACCAA CTCGTCCAGC AGGGTATTGC CGTTATTGTC
ATCTCTTCCG AATTACCTGA AGTGCTCGGC CTTAGCGATC GTGTACTGGT GATGCATGAA
GGGAAACTAA AAGCCAACCT GATAAATCAT AACCTGACTC AGGAGCAGGT GATGGAAGCC
GCATTGAGGA GCGAACATCA TGTCGAAAAG CAATCCGTCT GA
 
Protein sequence
MPYLLEMKNI TKTFGSVKAI DNVCLRLNAG EIVSLCGENG SGKSTLMKVL CGIYPHGSYE 
GEIIFAGEEI QASHIRDTER KGIAIIHQEL ALVKELTVLE NIFLGNEITH NGIMDYDLMT
LRCQKLLAQV SLSISPDTRV GDLGLGQQQL VEIAKALNKQ VRLLILDEPT ASLTEQETSI
LLDIIRDLQQ HGIACIYISH KLNEVKAISD TICVIRDGQH IGTRDAAGMS EDDIITMMVG
RELTALYPNE PHTTGDEILR IEHLTAWHPV NRHIKRVNDV SFSLKRGEIL GIAGLVGAGR
TETIQCLFGV WPGQWEGKIY IDGKQVDIRN CQQAIAQGIA MVPEDRKRDG IVPVMAVGKN
ITLAALNKFT GGISQLDDAA EQKCILESIQ QLKVKTSSPD LAIGRLSGGN QQKAILARCL
LLNPRILILD EPTRGIDIGA KYEIYKLINQ LVQQGIAVIV ISSELPEVLG LSDRVLVMHE
GKLKANLINH NLTQEQVMEA ALRSEHHVEK QSV