Gene EcDH1_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0117 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp122514 
End bp123905 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content56% 
IMG OID 
ProductL-seryl-tRNA(Sec) selenium transferase 
Protein accessionACX37812 
Protein GI260447390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG AAACGCGTTC CCTCTATAGT CAACTTCCGG CTATTGATCG CTTATTGCGC 
GATAGCTCCT TCCTTTCTTT GCGTGATACT TATGGTCACA CCCGCGTGGT GGAATTGTTG
CGTCAGATGC TCGACGAAGC GCGAGAAGTG ATTCGTGGCA GCCAGACGCT GCCTGCGTGG
TGTGAAAACT GGGCGCAAGA AGTCGATGCC CGGTTGACGA AAGAAGCGCA GAGCGCGCTG
CGTCCGGTGA TCAACCTGAC GGGAACCGTG CTGCATACCA ACCTTGGGCG AGCTTTACAG
GCGGAAGCCG CGGTGGAAGC CGTTGCGCAG GCTATGCGTT CGCCAGTGAC CCTCGAGTAT
GATCTGGACG ACGCCGGACG CGGACATCGC GATCGGGCGC TGGCGCAGCT GCTGTGCCGT
ATTACGGGGG CGGAAGATGC CTGTATCGTC AATAACAATG CGGCGGCGGT GTTATTGATG
TTGGCGGCCA CTGCCAGCGG AAAAGAGGTG GTGGTATCTC GCGGCGAACT GGTGGAGATT
GGCGGCGCGT TTCGTATTCC CGATGTTATG CGTCAGGCAG GCTGCACCCT ACACGAAGTA
GGGACCACCA ACCGCACGCA CGCGAATGAT TATCGTCAGG CGGTGAATGA AAATACCGCA
CTGTTGATGA AAGTACATAC CAGTAACTAC AGCATTCAGG GGTTCACCAA AGCGATAGAT
GAAGCGGAAC TGGTGGCGCT CGGCAAAGAG CTGGATGTTC CCGTAGTGAC TGATTTAGGC
AGTGGCTCGC TGGTCGATCT TAGCCAGTAC GGTTTGCCGA AAGAGCCAAT GCCGCAGGAG
TTGATTGCGG CGGGCGTCAG TCTGGTGAGT TTCTCCGGCG ACAAGTTGTT AGGCGGGCCG
CAGGCAGGAA TTATTGTTGG TAAAAAAGAG ATGATCGCCC GCCTGCAAAG CCACCCGCTG
AAGCGTGCAT TACGCGCGGA TAAAATGACC CTCGCGGCGC TGGAAGCCAC GTTGCGTCTT
TATTTACACC CTGAAGCTCT GAGTGAAAAA TTACCGACCC TGCGCCTGCT TACCCGCAGC
GCAGAGGTCA TTCAAATCCA GGCACAACGT TTACAGGCCC CCCTTGCCGC ACATTACGGC
GCGGAGTTTG CGGTACAGGT TATGCCATGT CTTTCGCAGA TTGGCAGTGG TTCGCTGCCG
GTTGATCGCC TGCCGAGCGC GGCATTAACG TTTACACCCC ATGATGGACG CGGTAGCCAC
CTTGAGTCAT TAGCCGCCCG CTGGCGTGAA TTGCCAGTGC CGGTGATTGG TCGTATTTAT
GACGGACGAT TGTGGCTGGA TTTACGCTGC CTTGAAGATG AGCAACGGTT TTTGGAGATG
TTGTTGAAAT GA
 
Protein sequence
MTTETRSLYS QLPAIDRLLR DSSFLSLRDT YGHTRVVELL RQMLDEAREV IRGSQTLPAW 
CENWAQEVDA RLTKEAQSAL RPVINLTGTV LHTNLGRALQ AEAAVEAVAQ AMRSPVTLEY
DLDDAGRGHR DRALAQLLCR ITGAEDACIV NNNAAAVLLM LAATASGKEV VVSRGELVEI
GGAFRIPDVM RQAGCTLHEV GTTNRTHAND YRQAVNENTA LLMKVHTSNY SIQGFTKAID
EAELVALGKE LDVPVVTDLG SGSLVDLSQY GLPKEPMPQE LIAAGVSLVS FSGDKLLGGP
QAGIIVGKKE MIARLQSHPL KRALRADKMT LAALEATLRL YLHPEALSEK LPTLRLLTRS
AEVIQIQAQR LQAPLAAHYG AEFAVQVMPC LSQIGSGSLP VDRLPSAALT FTPHDGRGSH
LESLAARWRE LPVPVIGRIY DGRLWLDLRC LEDEQRFLEM LLK