Gene EcDH1_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0086 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp88844 
End bp89776 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content51% 
IMG OID 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionACX37784 
Protein GI260447362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000290393 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ACATCGTTAA AGCCCTGAAT 
GATAAAGGCA TCACCGATAT TCTGGTGGTG GACAACCTGA AAGACGGCAC CAAGTTTGTG
AACCTGGTGG ATCTGAATAT CGCAGACTAT ATGGATAAGG AAGACTTCCT GATCCAGATT
ATGGCTGGCG AAGAGTTCGG CGATGTCGAA GCGATTTTCC ACGAAGGCGC GTGCTCTTCC
ACCACCGAGT GGGACGGCAA GTATATGATG GATAACAACT ATCAATACTC CAAGGAGCTG
CTGCACTACT GCCTGGAGCG TGAAATCCCG TTCCTGTACG CTTCTTCCGC AGCCACCTAC
GGCGGACGCA CCTCCGACTT TATTGAATCC CGCGAGTACG AAAAACCGTT GAACGTCTAC
GGTTACTCAA AATTCCTGTT TGATGAATAT GTTCGTCAAA TCCTGCCTGA AGCGAACTCG
CAGATTGTTG GCTTCCGTTA TTTCAACGTT TATGGACCGC GTGAAGGCCA TAAAGGCAGC
ATGGCGAGCG TCGCTTTCCA TCTCAACACC CAGCTTAACA ACGGTGAATC ACCGAAGCTG
TTTGAAGGTA GCGAGAACTT CAAACGCGAC TTCGTCTATG TGGGCGACGT GGCTGATGTG
AATCTGTGGT TCCTGGAAAA TGGCGTTTCC GGCATCTTCA ATCTCGGTAC TGGTCGTGCG
GAATCCTTCC AGGCGGTAGC TGATGCTACG CTGGCTTATC ACAAGAAAGG CCAGATCGAA
TACATTCCGT TCCCGGATAA ACTGAAAGGC CGCTATCAGG CGTTCACTCA GGCAGATCTG
ACAAATCTGC GCGCGGCGGG TTACGACAAA CCGTTCAAAA CCGTTGCTGA AGGTGTAACG
GAATACATGG CCTGGCTGAA TCGCGACGCA TAA
 
Protein sequence
MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLNIADY MDKEDFLIQI 
MAGEEFGDVE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY
GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS
MASVAFHLNT QLNNGESPKL FEGSENFKRD FVYVGDVADV NLWFLENGVS GIFNLGTGRA
ESFQAVADAT LAYHKKGQIE YIPFPDKLKG RYQAFTQADL TNLRAAGYDK PFKTVAEGVT
EYMAWLNRDA