Gene EcDH1_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0081 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp83567 
End bp84418 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content33% 
IMG OID 
Productlipopolysaccharide core biosynthesis protein 
Protein accessionACX37779 
Protein GI260447357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TTAGATACAT TGACAAAAAA GATGTTGAAA ACCTGATTGA AAATAAAATA 
TCTGATGATG TTATTATTTT TCTTTCGGGC CCTACATCGC AAAAAACACC TTTGTCAGTA
TTACGAACAA AGGATATTAT TGCTGTCAAT GGTTCTGCGC AATATCTGTT AAGTAATAAT
ATCGTTCCTT TTATATATGT ACTTACAGAT GTCCGATTTT TACATCAGCG TCGTGATGAT
TTTTATAAAT TTAGCCAGAG AAGTCGTTAT ACCATAGTAA ACGTTGACGT TTATGAACAC
GCTTCCAAAG AAGATAAACT TTATATCCTC CAGAACTGCC TCGTATTACG GTCCTTTTAC
CGTCGGGAAA AAGGTGGTTT TATAAAGAAG ATTAAATTTA ATATTTTGAG ACAGATTCAC
AAAGAACTGC TGATCTCTGT ACCGTTGTCT AAAAAAGGTC GTCTGGTTGG ATTTTGCAAG
GACATTAGTC TTGGTTATTG CTCATGCCAT ACTATTGCCT TTGCTGCAAT TCAAATCGCA
TATTCACTTA AGTATGCGCG GATTATTTGT TCTGGTCTTG ATTTAACGGG TAGCTGTTCT
CGTTTCTATG ATGAGAATAA AAATCCCATG CCCTCGGAAT TAAGTAGGGA TTTATTCAAA
ATATTGCCAT TTTTTCGTTT TATGCATGAT AATGTAAAAG ATATTAATAT TTATAATTTA
TCAGATGATA CAGCTATTTC TTACGATGTA ATTCCATTTA TTAAACTTCA AGACATCAGT
GCAGAAGAAT CAAAAGATAT GACAAGAAAA AAAATGCAAT ATAGAACTTC AACCGATTCT
TATGCTAATT AA
 
Protein sequence
MKNIRYIDKK DVENLIENKI SDDVIIFLSG PTSQKTPLSV LRTKDIIAVN GSAQYLLSNN 
IVPFIYVLTD VRFLHQRRDD FYKFSQRSRY TIVNVDVYEH ASKEDKLYIL QNCLVLRSFY
RREKGGFIKK IKFNILRQIH KELLISVPLS KKGRLVGFCK DISLGYCSCH TIAFAAIQIA
YSLKYARIIC SGLDLTGSCS RFYDENKNPM PSELSRDLFK ILPFFRFMHD NVKDINIYNL
SDDTAISYDV IPFIKLQDIS AEESKDMTRK KMQYRTSTDS YAN