Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0081 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 83567 |
End bp | 84418 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | lipopolysaccharide core biosynthesis protein |
Protein accession | ACX37779 |
Protein GI | 260447357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TTAGATACAT TGACAAAAAA GATGTTGAAA ACCTGATTGA AAATAAAATA TCTGATGATG TTATTATTTT TCTTTCGGGC CCTACATCGC AAAAAACACC TTTGTCAGTA TTACGAACAA AGGATATTAT TGCTGTCAAT GGTTCTGCGC AATATCTGTT AAGTAATAAT ATCGTTCCTT TTATATATGT ACTTACAGAT GTCCGATTTT TACATCAGCG TCGTGATGAT TTTTATAAAT TTAGCCAGAG AAGTCGTTAT ACCATAGTAA ACGTTGACGT TTATGAACAC GCTTCCAAAG AAGATAAACT TTATATCCTC CAGAACTGCC TCGTATTACG GTCCTTTTAC CGTCGGGAAA AAGGTGGTTT TATAAAGAAG ATTAAATTTA ATATTTTGAG ACAGATTCAC AAAGAACTGC TGATCTCTGT ACCGTTGTCT AAAAAAGGTC GTCTGGTTGG ATTTTGCAAG GACATTAGTC TTGGTTATTG CTCATGCCAT ACTATTGCCT TTGCTGCAAT TCAAATCGCA TATTCACTTA AGTATGCGCG GATTATTTGT TCTGGTCTTG ATTTAACGGG TAGCTGTTCT CGTTTCTATG ATGAGAATAA AAATCCCATG CCCTCGGAAT TAAGTAGGGA TTTATTCAAA ATATTGCCAT TTTTTCGTTT TATGCATGAT AATGTAAAAG ATATTAATAT TTATAATTTA TCAGATGATA CAGCTATTTC TTACGATGTA ATTCCATTTA TTAAACTTCA AGACATCAGT GCAGAAGAAT CAAAAGATAT GACAAGAAAA AAAATGCAAT ATAGAACTTC AACCGATTCT TATGCTAATT AA
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Protein sequence | MKNIRYIDKK DVENLIENKI SDDVIIFLSG PTSQKTPLSV LRTKDIIAVN GSAQYLLSNN IVPFIYVLTD VRFLHQRRDD FYKFSQRSRY TIVNVDVYEH ASKEDKLYIL QNCLVLRSFY RREKGGFIKK IKFNILRQIH KELLISVPLS KKGRLVGFCK DISLGYCSCH TIAFAAIQIA YSLKYARIIC SGLDLTGSCS RFYDENKNPM PSELSRDLFK ILPFFRFMHD NVKDINIYNL SDDTAISYDV IPFIKLQDIS AEESKDMTRK KMQYRTSTDS YAN
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