Gene EcDH1_0080 details

Gene Information

• Locus tag: EcDH1_0080
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 82798
• End bp: 83496
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 35%
• Product: lipopolysaccharide core biosynthesis protein
• Protein accession: ACX37778
• Protein GI: 260447356

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAGA AGAGCAAGAT CAAAGACTTG GTTGTTTTTA CCGATGAAAA CAATTCAAAG 
TACCTCAATG TATTAAATGA CTTCTTGTCT TATAATATAA ATATCATCAA GGTTTTTCGT 
TCTATTGATG ATACAAAAGT TATGCTTATT GATACCGATT ACGGTAAATT GATTCTTAAG 
GTTTTTTCTC CGAAAGTTAA GCGTAACGAA CGTTTCTTTA AGTCTCTGTT AAAAGGTGAT 
TATTACGAAC GCCTTTTTGA GCAAACCCAA AAAGTACGAA ATGAAGGGTT AAATACACTC 
AATGACTTTT ATTTATTGGC TGAACGGAAA ACCTTACGTT TTGTCCATAC TTATATCATG 
ATCATCGAGT ATATTGATGG CATAGAGTTG TGTGATATGC CCGATATTGA TGATGCGCTA 
AAAAATAAAA TTCAGCAATC AATTAATGCC TTACATCAAC ATGGCATGGT TTCTGGCGAC 
CCCCATCGTG GTAACTTCAT TATAAAAAAT GGTGAGGTTC GAATTATCGA TCTCTCCGGA 
AAGCGTGCTT CAGCGCAGCG TAAAGCGAAA GATCGTATTG ACTTAGAGCG TCATTACGGT 
ATTAAAAATG AGATTAGAGA TCTAGGCTAT TATCTTTTAG TATATCGTAA AAAAATGCGC 
AATTTTATGC GGCGTTTGAA AGGGAAACCA GCGCGCTAA 

 

Protein sequence

MIQKSKIKDL VVFTDENNSK YLNVLNDFLS YNINIIKVFR SIDDTKVMLI DTDYGKLILK 
VFSPKVKRNE RFFKSLLKGD YYERLFEQTQ KVRNEGLNTL NDFYLLAERK TLRFVHTYIM 
IIEYIDGIEL CDMPDIDDAL KNKIQQSINA LHQHGMVSGD PHRGNFIIKN GEVRIIDLSG 
KRASAQRKAK DRIDLERHYG IKNEIRDLGY YLLVYRKKMR NFMRRLKGKP AR