Gene EcDH1_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0078 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp80705 
End bp81724 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content36% 
IMG OID 
ProductLipopolysaccharide 3-alpha-galactosyltransferase 
Protein accessionACX37776 
Protein GI260447354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGG TGTTTTTCCA GGAAACTGAG TTTCTTAATT CAGTTATTGA TTATGATCAT 
AAAGTAGAAA CAGAAAATCT TTGTCTGGAC ATCGCTTATG GAACTGACAA AAACTTTCTA
TTTGGTTGCG GAATTTCGAT TGCTTCAATA TTAAAATATA ATGAAGGAAG TCGATTGTGT
TTCCATATTT TTACTGATTA TTTTGGTGAT GATGATCGTA AGTATTTTGA TGCCCTGGCG
TTGCAGTATA AAACCAGAAT TAAAATATAT CTGATTAATG GTGATCGACT GCGCTCATTG
CCTAGCACTA AGAATTGGAC TCATGCAATA TATTTTCGTT TTGTTATTGC AGATTACTTT
ATTAATAAGG CGCCTAAAGT CCTTTATCTG GATGCAGATA TCATTTGTCA GGGGACTATT
GAGCCACTAA TTAATTTCTC ATTTCCTGAC GATAAAGTCG CAATGGTTGT TACAGAAGGG
CAAGCTGACT GGTGGGAAAA ACGCGCCCAT TCGTTAGGTG TTGCGGGAAT TGCTAAAGGT
TACTTTAACT CCGGTTTTTT ATTGATTAAT ACTGCCCAAT GGGCGGCTCA GCAGGTTTCT
GCACGAGCTA TTGCAATGCT AAATGAGCCA GAAATAATCA AAAAAATAAC ACATCCTGAT
CAGGATGTGT TAAATATGTT GCTGGCGGAT AAACTTATTT TCGCTGATAT TAAATATAAC
ACCCAGTTCA GCTTAAATTA TCAACTCAAA GAAAGCTTTA TAAACCCAGT AACCAACGAT
ACTATTTTTA TCCATTATAT CGGGCCAACC AAGCCCTGGC ATGATTGGGC CTGGGATTAT
CCTGTATCAC AAGCCTTTAT GGAGGCAAAA AATGCTTCGC CATGGAAGAA TACGGCGTTG
CTGAAACCGA ACAATAGCAA TCAATTAAGA TATAGCGCAA AACATATGCT TAAAAAGCAT
AGATATCTAA AAGGATTTAG CAACTATCTT TTTTATTTTA TTGAAAAGAT AAAGCATTAA
 
Protein sequence
MQQVFFQETE FLNSVIDYDH KVETENLCLD IAYGTDKNFL FGCGISIASI LKYNEGSRLC 
FHIFTDYFGD DDRKYFDALA LQYKTRIKIY LINGDRLRSL PSTKNWTHAI YFRFVIADYF
INKAPKVLYL DADIICQGTI EPLINFSFPD DKVAMVVTEG QADWWEKRAH SLGVAGIAKG
YFNSGFLLIN TAQWAAQQVS ARAIAMLNEP EIIKKITHPD QDVLNMLLAD KLIFADIKYN
TQFSLNYQLK ESFINPVTND TIFIHYIGPT KPWHDWAWDY PVSQAFMEAK NASPWKNTAL
LKPNNSNQLR YSAKHMLKKH RYLKGFSNYL FYFIEKIKH