Gene EcDH1_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0070 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp72611 
End bp73420 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionACX37768 
Protein GI260447346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00858253 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT TACCCGAAGT TGAAACCAGC CGCCGCGGCA TAGAACCGCA TCTCGTTGGT 
GCAACCATTC TTCATGCAGT GGTGCGCAAC GGACGCTTGC GCTGGCCGGT TTCAGAAGAG
ATCTACCGTT TAAGCGACCA ACCAGTGCTT AGCGTGCAGC GGCGGGCTAA ATATCTGCTG
CTGGAGCTGC CTGAGGGCTG GATTATCATT CATTTAGGGA TGTCTGGCAG CCTGCGCATC
CTTCCAGAAG AACTTCCCCC TGAAAAGCAT GACCATGTGG ATTTGGTGAT GAGCAACGGC
AAAGTGCTGC GCTACACCGA TCCGCGCCGC TTTGGTGCCT GGCTGTGGAC CAAAGAGCTG
GAAGGGCATA ATGTGCTGAC CCATCTTGGA CCGGAGCCGC TTAGCGACGA TTTCAATGGT
GAGTATCTGC ATCAGAAGTG CGCGAAGAAA AAAACGGCGA TTAAACCGTG GCTGATGGAT
AACAAGCTGG TGGTAGGGGT AGGGAATATC TATGCCAGCG AATCACTGTT TGCGGCGGGG
ATCCATCCGG ATCGGCTGGC GTCATCACTG TCGCTGGCAG AGTGTGAATT GTTAGCTCGG
GTGATTAAAG CGGTGTTGCT GCGTTCGATT GAGCAGGGTG GTACAACGCT GAAAGATTTT
CTGCAAAGTG ATGGTAAACC GGGCTATTTC GCTCAGGAAT TGCAGGTTTA CGGGCGAAAA
GGTGAGCCGT GTCGGGTGTG CGGTACGCCG ATTGTGGCGA CTAAACATGC GCAGCGGGCA
ACGTTTTATT GTCGGCAGTG CCAGAAGTAA
 
Protein sequence
MPELPEVETS RRGIEPHLVG ATILHAVVRN GRLRWPVSEE IYRLSDQPVL SVQRRAKYLL 
LELPEGWIII HLGMSGSLRI LPEELPPEKH DHVDLVMSNG KVLRYTDPRR FGAWLWTKEL
EGHNVLTHLG PEPLSDDFNG EYLHQKCAKK KTAIKPWLMD NKLVVGVGNI YASESLFAAG
IHPDRLASSL SLAECELLAR VIKAVLLRSI EQGGTTLKDF LQSDGKPGYF AQELQVYGRK
GEPCRVCGTP IVATKHAQRA TFYCRQCQK