Gene EcDH1_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0054 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp58558 
End bp59247 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionACX37752 
Protein GI260447330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAA CACGTTATGC ACGCATCTGC GAAATGCTCG CCAGGCGGCA GCCTGATCTG 
ACCGTCTGCA TGGAGCAGGT CCACAAACCT CATAACGTTT CTGCGATTAT TCGTACCGCA
GATGCCGTTG GCGTACATGA AGTTCACGCC GTCTGGCCTG GTAGCCGCAT GCGCACCATG
GCTTCGGCAG CGGCGGGTAG TAACAGCTGG GTACAGGTGA AAACACACCG CACCATTGGC
GATGCCGTCG CTCATCTCAA AGGCCAGGGC ATGCAGATTC TGGCAACCCA TCTTTCTGAT
AACGCTGTCG ATTTCCGCGA AATTGATTAC ACTCGCCCGA CCTGCATTTT GATGGGACAG
GAGAAAACGG GCATCACGCA GGAAGCATTG GCCCTGGCGG ATCAGGACAT CATCATTCCG
ATGATCGGCA TGGTGCAGTC GCTGAATGTT TCCGTTGCCT CAGCCCTCAT TCTTTACGAA
GCCCAGCGTC AGCGGCAAAA TGCAGGCATG TACCTGCGTG AAAACAGCAT GTTGCCGGAA
GCAGAGCAAC AACGCCTGTT GTTTGAAGGC GGCTATCCGG TGCTGGCGAA AGTCGCAAAA
CGCAAAGGCC TGCCTTATCC CCACGTCAAT CAGCAAGGCG AGATCGAAGC TGATGCCGAC
TGGTGGGCTA CTATGCAGGC TGCAGGGTAA
 
Protein sequence
MNPTRYARIC EMLARRQPDL TVCMEQVHKP HNVSAIIRTA DAVGVHEVHA VWPGSRMRTM 
ASAAAGSNSW VQVKTHRTIG DAVAHLKGQG MQILATHLSD NAVDFREIDY TRPTCILMGQ
EKTGITQEAL ALADQDIIIP MIGMVQSLNV SVASALILYE AQRQRQNAGM YLRENSMLPE
AEQQRLLFEG GYPVLAKVAK RKGLPYPHVN QQGEIEADAD WWATMQAAG