Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0002 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1441 |
End bp | 2541 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | DNA polymerase III, beta subunit |
Protein accession | ACX37703 |
Protein GI | 260447281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000276402 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CCGTAGAACG TGAGCATTTA TTAAAACCGC TACAACAGGT GAGCGGTCCG TTAGGTGGTC GTCCTACGCT ACCGATTCTC GGTAATCTGC TGTTACAGGT TGCTGACGGT ACGTTGTCGC TGACCGGTAC TGATCTCGAG ATGGAAATGG TGGCACGTGT TGCGCTGGTT CAGCCACACG AGCCAGGAGC GACGACCGTT CCGGCGCGCA AATTCTTTGA TATCTGCCGT GGTCTGCCTG AAGGCGCGGA AATTGCCGTG CAGCTGGAAG GTGAACGGAT GCTGGTACGC TCCGGGCGTA GCCGTTTTTC GCTGTCTACC CTGCCAGCGG CGGATTTCCC GAACCTCGAT GACTGGCAGA GTGAAGTCGA ATTTACCCTG CCGCAGGCAA CGATGAAGCG TCTGATTGAA GCGACCCAGT TTTCTATGGC GCATCAGGAC GTTCGCTATT ACTTAAATGG TATGCTGTTT GAAACCGAAG GTGAAGAACT GCGCACCGTG GCAACCGACG GCCACCGTCT GGCGGTCTGT TCAATGCCAA TTGGTCAATC TTTGCCAAGC CATTCGGTGA TCGTACCGCG TAAAGGCGTG ATTGAACTGA TGCGTATGCT CGACGGCGGC GACAATCCGC TGCGCGTACA GATTGGCAGC AACAACATTC GCGCCCACGT TGGCGACTTT ATCTTCACCT CCAAACTGGT GGATGGTCGC TTCCCGGATT ATCGCCGCGT TCTGCCGAAG AACCCGGACA AACATCTGGA AGCTGGCTGC GATCTGCTCA AGCAGGCGTT TGCTCGCGCG GCGATTCTCT CTAACGAGAA ATTCCGCGGC GTACGTCTTT ATGTCAGCGA AAACCAGCTG AAAATCACCG CCAACAACCC GGAACAGGAA GAAGCGGAAG AGATCCTCGA CGTTACCTAT AGCGGTGCGG AGATGGAAAT CGGCTTCAAC GTCAGTTATG TGCTGGATGT TCTGAACGCG CTGAAATGCG AAAACGTCCG CATGATGCTG ACCGATTCGG TTTCCAGCGT GCAGATTGAA GATGCGGCCA GCCAGAGCGC GGCTTATGTT GTCATGCCAA TGAGACTGTA A
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Protein sequence | MKFTVEREHL LKPLQQVSGP LGGRPTLPIL GNLLLQVADG TLSLTGTDLE MEMVARVALV QPHEPGATTV PARKFFDICR GLPEGAEIAV QLEGERMLVR SGRSRFSLST LPAADFPNLD DWQSEVEFTL PQATMKRLIE ATQFSMAHQD VRYYLNGMLF ETEGEELRTV ATDGHRLAVC SMPIGQSLPS HSVIVPRKGV IELMRMLDGG DNPLRVQIGS NNIRAHVGDF IFTSKLVDGR FPDYRRVLPK NPDKHLEAGC DLLKQAFARA AILSNEKFRG VRLYVSENQL KITANNPEQE EAEEILDVTY SGAEMEIGFN VSYVLDVLNA LKCENVRMML TDSVSSVQIE DAASQSAAYV VMPMRL
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