Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_04229 |
Symbol | hpaE |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 4506444 |
End bp | 4507910 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase |
Protein accession | ACT46010 |
Protein GI | 253980340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TAAATCATTG GATCAACGGC AAAAATGTTG CAGGTAACGA CTACTTCCAG ACCACCAATC CGGCAACGGG TGAAGTGCTG GCGGATGTGG CCTCTGGCGG TGAAGCGGAG ATCAATCAGG CGGTAGCGGC AGCGAAAGAG GCGTTCCCGA AATGGGCCAA TCTGCCGATG AAAGAGCGTG CGCGCCTGAT GCGCCGTCTG GGCGATCTGA TCGACCAGAA CGTGCCAGAG ATCGCCGCGA TGGAAACCGC GGACACCGGC CTGCCGATCC ATCAGACCAA AAATGTGTTG ATCCCACGCG CTTCTCACAA CTTTGAATTT TTCGCGGAAG TCTGCCAGCA GATGAACGGC AAGACCTATC CGGTTGACGA CAAGATGCTC AACTACACGC TGGTGCAACC GGTAGGCGTT TGTGCGCTGG TATCGCCGTG GAACGTGCCG TTTATGACCG CCACATGGAA GGTCGCGCCG TGTCTTGCGC TGGGCAATAC CGCGGTGCTG AAGATGTCGG AACTCTCCCC GCTGACCGCT GACCGCCTGG GTGAGCTGGC GCTGGAAGCC GGTATTCCGG CGGGCGTGCT GAACGTGGTA CAGGGCTACG GCGCAACCGC AGGGGATGCG CTGGTTCGTC ATCATGACGT ACGTGCCGTG TCGTTCACCG GCGGTACGGC CACCGGGCGC AACATCATGA AAAACGCCGG GCTGAAAAAA TACTCCATGG AACTGGGCGG TAAATCGCCG GTGCTGATTT TTGAAGATGC CGATATTGAA CGTGCGCTGG ACGCTGCCCT GTTCACCATC TTCTCAATCA ACGGCGAACG CTGCACCGCC GGTTCGCGCA TTTTTATTCA ACAGAGCATC TATCCAGAAT TCGTTAAACG CTTTGCCGAA CGCGCCAACC GTCTGCGCGT GGGCGATCCG ACCGATCCGA ATACCCAGGT TGGGGCGCTT ATCAGCCAGC AGCACTGGGA AAAAGTCTCC GGCTATATCC GTCTAGGCAT TGAAGAAGGC GCAACCCTGC TGGTGGGCGG TCCGGATAAA CCGTCCGACC TGCCTGCGCA CCTGAAAGGC GGCAACTTCC TGCGCCCAAC GGTGCTGGCG GACGTAGATA ACCGTATGCG CGTTGCCCAG GAAGAGATTT TCGGGCCGGT CGCCTGCCTG CTGCCGTTTA AAGATGAAGC CGAAGGCTTA CGCCTGGCAA ACGACGTGGA GTACGGCCTC GCGTCGTACA TCTGGACACA GGATGTCAGC AAAGTGTTAC GCCTGGCGCG TGGCATTGAA GCAGGCATGG TGTTCGTCAA CACCCAGAAC GTGCGCGACC TGCGCCAGCC GTTTGGCGGC GTAAAAGCCT CCGGCACCGG GCGTGAAGGC GGTGAGTACA GCTTCGAAGT GTTCGCGGAA ATGAAGAACG TCTGCATTTC CATGGGCGAC CATCCAATTC CAAAATGGGG AGTCTGA
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Protein sequence | MKKVNHWING KNVAGNDYFQ TTNPATGEVL ADVASGGEAE INQAVAAAKE AFPKWANLPM KERARLMRRL GDLIDQNVPE IAAMETADTG LPIHQTKNVL IPRASHNFEF FAEVCQQMNG KTYPVDDKML NYTLVQPVGV CALVSPWNVP FMTATWKVAP CLALGNTAVL KMSELSPLTA DRLGELALEA GIPAGVLNVV QGYGATAGDA LVRHHDVRAV SFTGGTATGR NIMKNAGLKK YSMELGGKSP VLIFEDADIE RALDAALFTI FSINGERCTA GSRIFIQQSI YPEFVKRFAE RANRLRVGDP TDPNTQVGAL ISQQHWEKVS GYIRLGIEEG ATLLVGGPDK PSDLPAHLKG GNFLRPTVLA DVDNRMRVAQ EEIFGPVACL LPFKDEAEGL RLANDVEYGL ASYIWTQDVS KVLRLARGIE AGMVFVNTQN VRDLRQPFGG VKASGTGREG GEYSFEVFAE MKNVCISMGD HPIPKWGV
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