Gene ECD_04225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04225 
SymbolhpaI 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4503531 
End bp4504319 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionACT46006 
Protein GI253980336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GTTTTAAAGC GGCGCTGAAA GCAGGCCGTC CGCAGATTGG ATTATGGCTG 
GGGCTGAGCA GCAGCTACAG CGCGGAGTTA CTGGCCGGAG CAGGATTCGA CTGGTTGTTG
ATCGACGGTG AGCACGCACC GAACAACGTA CAAACCGTGC TCACCCAGCT ACAGGCGATT
GCGCCCTATC CCAGCCAGCC GGTAGTACGT CCGTCGTGGA ACGATCCGGT GCAAATCAAA
CAACTGCTGG ACGTCGGCAC ACAAACCTTA CTGGTGCCGA TGGTACAAAA CGCCGACGAA
GCCCGTGAAG CGGTACGCGC CACCCGTTAT CCCCCCGCCG GTATTCGCGG TGTGGGCAGT
GCGCTGGCTC GCGCCTCGCG CTGGAATCGC ATTCCTGATT ACCTGCAAAA AGCCAACGAT
CAAATGTGCG TGCTGGTGCA GATCGAAACG CGTGAGGCAA TGAAGAACTT ACCGCAGATT
CTGGACGTGG AAGGCGTCGA CGGCGTGTTT ATCGGCCCGG CGGATCTGAG CGCCGATATG
GGTTATGCCG GTAATCCGCA GCACCCGGAA GTACAGGCCG CCATTGAGCA GGCGATCGTG
CAGATCCGCG AAGCGGGCAA AGCGCCGGGG ATCCTGATCG CCAATGAGCT ACTGGCAAAA
CGCTATCTGG AACTGGGCGC GCTGTTTGTC GCCGTCGGCG TTGACACCAC CCTGCTCGCC
CGCGCCGCCG AAGCGCTGGC AGCACGGTTT GGCGCGCAGG CTACAGCGAT TAAGCCCGGC
GTGTATTAA
 
Protein sequence
MENSFKAALK AGRPQIGLWL GLSSSYSAEL LAGAGFDWLL IDGEHAPNNV QTVLTQLQAI 
APYPSQPVVR PSWNDPVQIK QLLDVGTQTL LVPMVQNADE AREAVRATRY PPAGIRGVGS
ALARASRWNR IPDYLQKAND QMCVLVQIET REAMKNLPQI LDVEGVDGVF IGPADLSADM
GYAGNPQHPE VQAAIEQAIV QIREAGKAPG ILIANELLAK RYLELGALFV AVGVDTTLLA
RAAEALAARF GAQATAIKPG VY