Gene ECD_04216 details

Gene Information

• Locus tag: ECD_04216
• Symbol: hsdR
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: -
• Start bp: 4490365
• End bp: 4493877
• Gene Length: 3513 bp
• Protein Length: 1170 aa
• Translation table: 11
• GC content: 54%
• Product: endonuclease R
• Protein accession: ACT45997
• Protein GI: 253980327

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAATA AATCCAATTT TGAATTCCTG AAGGGCGTCA ACGACTTTAC CTATGCCATC 
GCCTGTGCGG CGGAAAATAA CTACCCGGAT GATCCCAACA CGACGCTGAT TAAAATGCGT 
ATGTTTGGCG AAGCCACAGC GAAACATCTT GGTCTGTTAC TCAACATCCC CCCTTGTGAG 
AATCAACACG ATCTCCTGCG CGAACTCGGC AAAATCGCCT TCGTTGATGA CAACATTCTC 
TCTGTATTCC ACAAATTACG CCGCATTGGT AACCAGGCGG TGCACGAATA TCATAACGAT 
CTCGACGATG CCCAGATGTG CCTGCGACTC GGGTTTCGCC TGGCTGTCTG GTACTACCGT 
CTGGTCACTA AAGATTATGA CTTCCCGGTG CCGGTGTTTG TGTTGCCGGA ACGTGGTGAA 
AACCTCTATC ACCAGGAAGT GCTGACGCTA AAACAACAGC TTGAACAGCA GGTGCGAGAA 
AAAGCGCAGA GTCAGGCAGA AGTCGAAGCA CAACAGCAGA AGCTGGTTGC CCTGAACGGC 
TATATCGCCA TTCTGGAAGG CAAGCAGCAG GAAACCGAAG CGCAAACCCA GGCTCGCCTT 
GCTGCACTGG AAGCACAGCT CGCCGAGAAG AACGCGGAAC TGGCCAAGCA GACCGAACAG 
GAACGTAAGG CTTACCACAA AGAAATTACC GATCAGGCCA TCAAGCGTAC ACTCAATCTT 
AGCGAAGAAG AGAGCCGCTT CCTGATTGAC GCGCAACTGC GTAAAGCAGG CTGGCAGGCC 
GATAGCAAAA CCCTGCGCTT CTCCAAAGGC GCGCGCCCGG AACCCGGCGT CAATAAAGCC 
ATTGCCGAAT GGCCGACCGG GAAAGATGAA ACGGGTAATC AGGGCTTTGC GGATTATGTG 
CTGTTTGTCG GTCTCAAACC CATCGCGGTG GTAGAAGCGA AACGTAAAAA TATCGACGTT 
CCCGGCAAGC TCAATGAGTC GTATCGCTAC AGTAAATGTT TCGATAATGG CTTCCTGCGG 
GAAACCTTGC TTGAGCACTA TTCACCAGAT GAAGTGCATG AAGCGGTGCC AGAGTATGAA 
ACCAGCTGGC AGGACACCAG CGGCCAACAA CGGTTTAAAA TCCCCTTCTG CTACTCAACC 
AACGGGCGCG AATACCGCGC AGCGATGAAG ATTAAAAGCG GCATCTGGTA TCGCGACGTG 
CGTGATACCC GCAATATGTC GAAAGCCTTA CCCGAGTGGC ACCGCCCGGA AGAGCTGCTG 
GAAATGCTCG GCAGCGAACC GCAAAAACAG AATCAGTGGT TTGCCGATAA CCCTGGCATG 
AGTGAGCTGG GCCTGCGTTA TTATCAGGAA GATGCCGTCC GCGCGGTTGA AAAGGCAATC 
GTCAAGGGGC AACAAGAGAT CCTGCTGGCG ATGGCAACCG GTACCGGTAA AACCCGTACG 
GCAATTGCCA TGATGTTCCG CCTGATCCAG TCCCAGCGTT TTAAACGCAT TCTCTTCCTT 
GTCGACCGCC GTTCTCTTGG CGAACAGGCG CTGGGCGCGT TTGAAGATAC GCGTATTAAC 
GGCGACACCT TTAACAGCAT TTTCGACATT AAAGGGCTGA CGGATAAATT CCCTGAAGAC 
AGCACCAAAA TTCACGTTGC CACCGTACAG TCGCTGGTGA AACGCACCCT GCAATCGGAT 
GAACCGATGC CGGTAGCCCG TTACGACTGT ATCGTCGTCG ATGAAGCGCA TCGCGGCTAC 
ATTCTCGATA AAGAGCAGAC CGAAGGCGAA CTACAGTTCC GCAGTCAGCT GGATTACGTC 
TCTGCCTACC GTCGTATTCT CGATCACTTC GATGCGGTAA AAATCGCTCT CACCGCCACC 
CCGGCTCTGC ATACGGTGCA GATTTTCGGC GAGCCGGTTT ACCGTTACAC CTACCGTACC 
GCGGTTATCG ACGGTTTTCT GATCGACCAG GATCCGCCGA TTCAGATCAC CACCCGCAAC 
GCCCAGGAAG GGGTTTATCT CTCCAAAGGC GAGCAGGTTG AGCGCATCAG CCCGCAGGGG 
GAAGTGATCA ACGACACCCT GGAAGACGAT CAGGATTTTG AGGTCGCCGA CTTTAACCGT 
GGCCTGGTGA TCCCGGCGTT TAACCGCGCC GTCTGTAACG AACTCACCAA CTACCTTGAC 
CCGACCGGGT CACAAAAAAC GCTGGTCTTC TGCGTCACCA ATGCCCATGC CGATATGGTG 
GTGGAAGAGC TGCGTACCGC GTTCAAGAAA AAGTATCCAC AACTGGAGCA CGACGCGATC 
ATCAAGATCA CCGGTGATGC CGATAAAGAC GCGCGAAAAG TGCAGACCAT GATCACCCGC 
TTCAATAAAG AGCGGCTGCC CAATATCGTG GTCACCGTCG ACCTGCTGAC GACCGGCGTC 
GATATTCCGT CGATCTGTAA TATCGTGTTC CTGCGCAAGG TACGCAGCCG TATTCTGTAC 
GAGCAGATGA AAGGGCGCGC CACGCGCTTA TGCCCGGAGG TGAATAAAAC CAGCTTTAAG 
ATTTTCGACT GTGTCGATAT CTACAGCACG CTGGAGAGCG TCGACACCAT GCGTCCGGTG 
GTGGTGCGTC CGAAGGTGGA ACTGCAAACG CTGGTCAACG AAATTACCGA TTCAGAAACC 
TATAAAATCA CCGAAGCGGA TGGCCGCAGT TTTGCCGAGC ACAGCCATGA ACAACTGGTG 
GCGAAGCTCC AGCGCATCAT CGGCCTGGCC ACGTTTAACC GTGACCGCAG CGAAACGATA 
GACAAACAGG TGCGTCGTCT GGATGAGCTA TGCCAGGACG CGGCGGGGGT TAACTTTAAC 
GGCTTCGCCT CGCGCCTGCG GGAAAAAGGG CCGCACTGGA GCGCCGAAGT CTTTAACAAA 
CTACCTGGCT TTATCGCCCG TCTGGAAAAG CTGAAAACCG ACATCAACAA CCTGAATGAT 
GCGCCGATCT TCCTCGATAT CGACGATGAA GTGGTGAGCG TAAAATCGCT GTACGGTGAT 
TACGACACGC CGCAGGATTT CCTCGAAGCC TTTGACTCGC TGGTGCAACG TTCCCCGAAT 
GCACAGCCGG CATTGCAGGC GGTGATTAAT CGCCCGCGCG ATCTCACCCG TAAAGGGCTG 
GTCGAGCTAC AGGAGTGGTT TGACCGCCAG CACTTTGAGG AATCTTCCCT GCGCAAAGCA 
TGGCAAGAGA CGCGCAATGA AGATATCGCC GCCCGGCTGA TTGGACATAT TCGCCGCGCT 
GCGGTGGGCG ATGCGCTGAA ACCGTTTGAG GAACGTGTCG ATCACGCGCT GACGCGCATT 
AAGGGCGAAA ATGACTGGAG CAGCGAGCAA TTAAGCTGGC TCGATCGTTT AGCGCAGGCG 
CTGAAAGAGA AAGTGGTGCT CGACGACGAT GTCTTCAAAA CCGGCAACTT CCACCGTCGC 
GGCGGGAAGG CGATGCTGCA AAGAACCTTT GACGATAATC TCGACAACCT GCTCGATAAA 
TTCAGCGATT ACATTTGGGA CGAGCTGGCC TGA 

 

Protein sequence

MMNKSNFEFL KGVNDFTYAI ACAAENNYPD DPNTTLIKMR MFGEATAKHL GLLLNIPPCE 
NQHDLLRELG KIAFVDDNIL SVFHKLRRIG NQAVHEYHND LDDAQMCLRL GFRLAVWYYR 
LVTKDYDFPV PVFVLPERGE NLYHQEVLTL KQQLEQQVRE KAQSQAEVEA QQQKLVALNG 
YIAILEGKQQ ETEAQTQARL AALEAQLAEK NAELAKQTEQ ERKAYHKEIT DQAIKRTLNL 
SEEESRFLID AQLRKAGWQA DSKTLRFSKG ARPEPGVNKA IAEWPTGKDE TGNQGFADYV 
LFVGLKPIAV VEAKRKNIDV PGKLNESYRY SKCFDNGFLR ETLLEHYSPD EVHEAVPEYE 
TSWQDTSGQQ RFKIPFCYST NGREYRAAMK IKSGIWYRDV RDTRNMSKAL PEWHRPEELL 
EMLGSEPQKQ NQWFADNPGM SELGLRYYQE DAVRAVEKAI VKGQQEILLA MATGTGKTRT 
AIAMMFRLIQ SQRFKRILFL VDRRSLGEQA LGAFEDTRIN GDTFNSIFDI KGLTDKFPED 
STKIHVATVQ SLVKRTLQSD EPMPVARYDC IVVDEAHRGY ILDKEQTEGE LQFRSQLDYV 
SAYRRILDHF DAVKIALTAT PALHTVQIFG EPVYRYTYRT AVIDGFLIDQ DPPIQITTRN 
AQEGVYLSKG EQVERISPQG EVINDTLEDD QDFEVADFNR GLVIPAFNRA VCNELTNYLD 
PTGSQKTLVF CVTNAHADMV VEELRTAFKK KYPQLEHDAI IKITGDADKD ARKVQTMITR 
FNKERLPNIV VTVDLLTTGV DIPSICNIVF LRKVRSRILY EQMKGRATRL CPEVNKTSFK 
IFDCVDIYST LESVDTMRPV VVRPKVELQT LVNEITDSET YKITEADGRS FAEHSHEQLV 
AKLQRIIGLA TFNRDRSETI DKQVRRLDEL CQDAAGVNFN GFASRLREKG PHWSAEVFNK 
LPGFIARLEK LKTDINNLND APIFLDIDDE VVSVKSLYGD YDTPQDFLEA FDSLVQRSPN 
AQPALQAVIN RPRDLTRKGL VELQEWFDRQ HFEESSLRKA WQETRNEDIA ARLIGHIRRA 
AVGDALKPFE ERVDHALTRI KGENDWSSEQ LSWLDRLAQA LKEKVVLDDD VFKTGNFHRR 
GGKAMLQRTF DDNLDNLLDK FSDYIWDELA