| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_04206 |
|---|
| Symbol | yjiO |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 4476566 |
|---|
| End bp | 4477798 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | multidrug efflux system protein |
|---|
| Protein accession | ACT45987 |
|---|
| Protein GI | 253980317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.652544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTT TTTTTACCCG CCATGCCGCC ACGCTGTTTT TCCCGATGGC GTTGATTTTG
TATGACTTTG CTGCGTATCT GTCGACGGAT CTGATCCAGC CTGGGATCAT TAATGTGGTA
CGTGATTTTA ATGCCGATGT CAGTCTGGCC CCTGCTGCCG TCAGTCTCTA TCTTGCTGGC
GGTATGGCGT TACAGTGGCT GCTGGGGCCG CTTTCCGACA GAATTGGCCG CAGGCCGGTG
CTGATTACCG GGGCGCTAAT TTTTACCCTT GCCTGCGCCG CGACAATGTT CACAACGTCT
ATGACACAGT TTCTTATCGC GCGTGCAATT CAGGGCACCA GTATCTGTTT TATTGCCACC
GTTGGTTATG TCACGGTGCA GGAGGCGTTC GGACAGACAA AAGGGATCAA GTTGATGGCG
ATTATCACCT CCATCGTACT GATTGCGCCG ATTATCGGCC CGCTTTCCGG CGCAGCTCTG
ATGCACTTTA TGCACTGGAA AGTCCTTTTT GCCATCATTG CGGTTATGGG TTTTATCTCA
TTTGTTGGCT TACTGTTGGC GATGCCAGAG ACGGTGAAGC GCGGCGCGGT TCCGTTTAGC
GCCAAAAGCG TCTTGCGCGA TTTTCGTAAT GTCTTTTGCA ATCGGCTGTT CCTCTTTGGC
GCAGCAACCA TCTCTTTAAG CTATATCCCG ATGATGAGCT GGGTGGCTGT CTCGCCGGTG
ATCCTTATCG ATGCAGGCAG CTTAACAACT TCGCAGTTCG CCTGGACACA GGTTCCGGTG
TTCGGCGCGG TGATTGTTGC GAATGCCATC GTGGCGCGTT TTGTTAAAGA TCCGACCGAA
CCGCGGTTTA TCTGGCGTGC CGTACCCATT CAACTGGTCG GCCTCTCGCT GTTGATTGTC
GGCAATCTGC TGTCGCCGCA CGTCTGGCTG TGGTCGGTGC TGGGCACCAG TCTGTATGCT
TTCGGGATTG GTTTGATTTT CCCGACCTTA TTCCGCTTTA CGCTGTTTTC CAATAAGTTA
CCGAAAGGGA CCGTCTCCGC ATCGCTAAAT ATGGTGATCC TGATGGTGAT GTCGGTCTCG
GTCGAAATCG GCCGCTGGCT ATGGTTTAAC GGCGGTCGCT TGCCGTTTCA TCTGTTAGCC
GTTGTGGCGG GCGTTATCGT CGTTTTCACC CTGGCGGGAT TGCTCAATCG CGTGCGCCAG
CATCAGGCAG CCGAGCTAGT GGAGGAGCAG TGA
|
|---|
| Protein sequence | MPRFFTRHAA TLFFPMALIL YDFAAYLSTD LIQPGIINVV RDFNADVSLA PAAVSLYLAG
GMALQWLLGP LSDRIGRRPV LITGALIFTL ACAATMFTTS MTQFLIARAI QGTSICFIAT
VGYVTVQEAF GQTKGIKLMA IITSIVLIAP IIGPLSGAAL MHFMHWKVLF AIIAVMGFIS
FVGLLLAMPE TVKRGAVPFS AKSVLRDFRN VFCNRLFLFG AATISLSYIP MMSWVAVSPV
ILIDAGSLTT SQFAWTQVPV FGAVIVANAI VARFVKDPTE PRFIWRAVPI QLVGLSLLIV
GNLLSPHVWL WSVLGTSLYA FGIGLIFPTL FRFTLFSNKL PKGTVSASLN MVILMVMSVS
VEIGRWLWFN GGRLPFHLLA VVAGVIVVFT LAGLLNRVRQ HQAAELVEEQ
|
|---|
| |