| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_04107 |
|---|
| Symbol | treC |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 4374696 |
|---|
| End bp | 4376351 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | trehalose-6-P hydrolase |
|---|
| Protein accession | ACT45895 |
|---|
| Protein GI | 253980225 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATC TTCCCCACTG GTGGCAAAAC GGCGTTATCT ACCAGATTTA TCCAAAGAGT
TTTCAGGACA CCACGGGTAG CGGCACCGGC GATTTACGTG GCGTTATCCA ACGCCTGGAC
TATCTGCATA AACTGGGCGT TGATGCCATC TGGCTAACCC CCTTTTATAT CTCTCCCCAG
GTCGATAACG GTTACGACGT AGCGAACTAT ACGGCGATTG ATCCCATCTA CGGCACGCTG
GACGATTTTG ACGAACTGGT GACGCAGGCA AAATCGCGCG GGATTCGTAT CATTCTCGAT
ATGGTGTTTA ACCATACCTC TACCCAACAT GCCTGGTTTC GCGAGGCGCT GAACAAAGAA
AGCCCTTACC GCCAGTTTTA TATCTGGCGC GATGGCGAAC CAGAAACGCC ACCGAACAAC
TGGCGTTCAA AATTTGGCGG TAGTGCGTGG CGCTGGCATG CGGAAAGCGA ACAGTACTAT
TTGCATCTCT TTGCACCAGA ACAGGCGGAT CTCAACTGGG AGAATCCAGC GGTACGCGCA
GAGCTGAAAA AAGTCTGTGA ATTCTGGGCC GATCGTGGGG TCGACGGGTT GCGCCTGGAT
GTGGTGAATC TGATCTCCAA AGACCCGCGT TTCCCTGAAG ACCTGGATGG CGACGGGCGT
CGCTTCTACA CCGACGGGCC ACGAGCACAC GAGTTTTTGC ACGAGATGAA CCGCGATGTG
TTTACGCCAC GCGGGTTAAT GACCGTAGGT GAAATGTCCT CCACCAGCCT TGAGCATTGC
CAGCGATACG CGGCACTGAC AGGCAGTGAA TTGTCGATGA CCTTTAATTT TCATCACCTG
AAGGTCGATT ATCCCGGTGG TGAAAAATGG ACGCTGGCTA AACCTGACTT TGTGGCGTTG
AAAACATTGT TCCGCCACTG GCAACAAGGA ATGCACAACG TGGCATGGAA TGCCTTGTTC
TGGTGTAACC ACGATCAGCC GCGCATTGTT TCTCGCTTTG GTGATGAAGG TGAATACCGC
GTGCCTGCGG CAAAAATGCT GGCGATGGTG CTGCATGGCA TGCAGGGAAC GCCGTATATC
TACCAGGGCG AAGAGATTGG CATGACCAAC CCGCATTTCA CGCGCATTAC TGACTATCGC
GACGTGGAGA GCCTCAATAT GTTTGCCGAG CTGCGCAACG ATGGTCGTGA TGCCAACGAG
TTATTGGCAA TCCTCGCCAG TAAATCCCGT GACAACAGCC GCACGCCCAT GCAATGGAGC
AACGGCGATA ATGCCGGGTT TACGGCTGGC GAACCGTGGA TTGGCCTGGG CGATAACTAT
CAACAAATCA ACGTAGAAGC CGCGCTGGCC GATGACTCCT CGGTGTTTTA CACCTACCAA
AAGTTAATCG CACTGCGTAA GCAAGAAGCC ATCCTGACAT GGGGCAATTA CCAGGATCTG
CTGCCAAACA GCCCTGTATT GTGGTGCTAT CGCCGTGAAT GGAAGGGGCA AACCTTGCTG
GTCATTGCCA ACCTTAGCCG TGAGATCCAA CCCTGGCAGC CAGGGCAAAT GCGCGGCAAC
TGGCAGCTTG TGATGCATAA CTACGAAGAA GCCTCACCAC AACCCTGTGC CATGACTTTA
CGGCCTTTTG AGGCTGTCTG GTGGTTACAG AAGTAA
|
|---|
| Protein sequence | MTNLPHWWQN GVIYQIYPKS FQDTTGSGTG DLRGVIQRLD YLHKLGVDAI WLTPFYISPQ
VDNGYDVANY TAIDPIYGTL DDFDELVTQA KSRGIRIILD MVFNHTSTQH AWFREALNKE
SPYRQFYIWR DGEPETPPNN WRSKFGGSAW RWHAESEQYY LHLFAPEQAD LNWENPAVRA
ELKKVCEFWA DRGVDGLRLD VVNLISKDPR FPEDLDGDGR RFYTDGPRAH EFLHEMNRDV
FTPRGLMTVG EMSSTSLEHC QRYAALTGSE LSMTFNFHHL KVDYPGGEKW TLAKPDFVAL
KTLFRHWQQG MHNVAWNALF WCNHDQPRIV SRFGDEGEYR VPAAKMLAMV LHGMQGTPYI
YQGEEIGMTN PHFTRITDYR DVESLNMFAE LRNDGRDANE LLAILASKSR DNSRTPMQWS
NGDNAGFTAG EPWIGLGDNY QQINVEAALA DDSSVFYTYQ KLIALRKQEA ILTWGNYQDL
LPNSPVLWCY RREWKGQTLL VIANLSREIQ PWQPGQMRGN WQLVMHNYEE ASPQPCAMTL
RPFEAVWWLQ K
|
|---|
| |