Gene ECD_04096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04096 
SymbolytfQ 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4361577 
End bp4362533 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content50% 
IMG OID 
Productpredicted sugar transporter subunit: periplasmic-binding component of ABC superfamily 
Protein accessionACT45885 
Protein GI253980215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.639926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAC GCTTACTTGT AGTCTCTGCA GTCTCGGCAG CCATGTCGTC TATGGCGTTG 
GCCGCTCCAT TAACCGTAGG ATTTTCGCAG GTCGGATCGG AATCTGGCTG GCGCGCCGCA
GAAACCAATG TGGCGAAAAG TGAGGCCGAA AAACGCGGAA TTACGCTGAA AATTGCCGAT
GGTCAGCAAA AGCAGGAAAA CCAGATTAAA GCGGTACGTT CCTTCGTCGC GCAAGGGGTG
GATGCGATCT TTATCGCTCC GGTGGTTGCG ACTGGTTGGG AACCGGTATT AAAAGAGGCG
AAAGATGCCG AAATCCCGGT CTTCTTGCTC GATCGTTCTA TTGATGTGAA AGACAAATCT
CTCTATATGA CCACCGTCAC TGCCGACAAC ATTCTCGAAG GCAAGTTGAT TGGTGACTGG
CTGGTAAAAG AAGTGAATGG CAAACCATGC AACGTGGTGG AGCTGCAGGG CACTGTTGGG
GCCAGCGTCG CCATTGACCG TAAGAAAGGC TTTGCCGAAG CCATTAAGAA TGCGCCAAAT
ATCAAAATTA TCCGCTCGCA GTCAGGTGAC TTCACCCGCA GTAAAGGCAA AGAAGTCATG
GAGAGCTTTA TCAAAGCGGA AAACAACGGC AAAAACATCT GCATGGTTTA CGCCCATAAC
GACGACATGG TGATTGGTGC AATTCAGGCA ATTAAAGAAG CGGGCCTGAA ACCAGGCAAA
GATATTCTGA CAGGTTCTAT CGACGGCGTA CCGGATATCT ACAAAGCGAT GATTGATGGC
GAAGCGAACG CCAGTGTTGA ACTGACGCCG AATATGGCAG GTCCCGCCTT CGACGCGCTG
GAGAAATACA AAAAAGACGG CACCATGCCT GAAAAGCTTA CGCTGACCAA ATCCACCCTT
TATCTGCCTG ATACCGCAAA AGAAGAGTTA GAGAAGAAGA AAAATATGGG GTATTGA
 
Protein sequence
MWKRLLVVSA VSAAMSSMAL AAPLTVGFSQ VGSESGWRAA ETNVAKSEAE KRGITLKIAD 
GQQKQENQIK AVRSFVAQGV DAIFIAPVVA TGWEPVLKEA KDAEIPVFLL DRSIDVKDKS
LYMTTVTADN ILEGKLIGDW LVKEVNGKPC NVVELQGTVG ASVAIDRKKG FAEAIKNAPN
IKIIRSQSGD FTRSKGKEVM ESFIKAENNG KNICMVYAHN DDMVIGAIQA IKEAGLKPGK
DILTGSIDGV PDIYKAMIDG EANASVELTP NMAGPAFDAL EKYKKDGTMP EKLTLTKSTL
YLPDTAKEEL EKKKNMGY