Gene ECD_04000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04000 
SymbollysU 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4260285 
End bp4261802 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content47% 
IMG OID 
Productlysine tRNA synthetase, inducible 
Protein accessionACT45789 
Protein GI253980119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AAGAAACACG GGGAGCCAAT GAGGCTATTG ATTTTAACGA TGAACTGAGA 
AATCGCCGCG AAAAACTGGC GGCACTACGT CAGCAAGGTG TGGCGTTTCC CAATGATTTT
CGCCGCGACC ATACCTCTGA GCAGTTGCAC GAAGAGTTTG ATGCGAAGGA TAACCAGGAA
CTGGAATCCT TAAACATTGA AGTCTCGGTT GCTGGCCGAA TGATGACCCG TCGTATCATG
GGGAAAGCCT CCTTTGTAAC GTTGCAGGAT GTCGGTGGCC GTATTCAACT GTACGTTGCA
CGAGATAGCC TGCCAGAAGG TGTTTATAAC GATCAGTTTA AAAAATGGGA TCTGGGTGAC
ATTATCGGTG CCCGCGGTAC GCTGTTTAAG ACGCAAACGG GTGAGCTTTC CATTCACTGT
ACTGAGCTGC GCCTGCTGAC TAAAGCACTA CGTCCTTTAC CAGATAAATT CCATGGTCTG
CAGGATCAGG AAGTCCGTTA TCGTCAACGT TATCTGGACC TCATCGCTAA CGATAAATCC
CGTCAAACGT TTGTTGTCCG TTCAAAAATT CTGGCCGCTA TCCGTCAATT CATGGTCGCG
CGCGGCTTTA TGGAAGTAGA AACCCCGATG ATGCAGGTAA TTCCAGGTGG GGCATCTGCT
CGCCCGTTTA TTACCCATCA TAATGCTCTG GATTTAGATA TGTATCTGCG TATCGCGCCG
GAGCTGTATC TGAAACGTCT GGTTGTAGGC GGTTTTGAAC GGGTATTCGA AATCAACCGT
AACTTCCGTA ATGAAGGTAT TTCTGTTCGC CATAATCCTG AGTTCACAAT GATGGAACTC
TACATGGCGT ATGCGGATTA CCACGATTTG ATTGAACTGA CAGAGTCACT GTTCCGCACC
CTGGCACAAG AGGTTCTGGG TACCACTAAA GTCACTTATG GCGAGCATGT GTTTGATTTC
GGCAAACCGT TTGAAAAACT CACCATGCGC GAAGCAATCA AAAAATATCG TCCAGAAACC
GATATGGCCG ACCTGGATAA TTTTGATGCT GCTAAAGCAT TAGCTGAATC TATCGGTATT
ACGGTAGAGA AAAGCTGGGG GTTGGGACGT ATTGTCACAG AGATCTTTGA TGAAGTGGCA
GAAGCACATC TGATTCAGCC AACCTTTATT ACGGAATATC CGGCAGAAGT GTCCCCGCTG
GCACGCCGTA ATGATGTTAA CCCGGAAATC ACCGACCGTT TTGAATTCTT CATCGGTGGT
CGTGAAATCG GTAATGGTTT TAGCGAATTA AACGACGCAG AAGATCAGGC TGAACGTTTC
CAGGAACAGG TTAATGCTAA AGCTGCAGGT GACGACGAAG CCATGTTCTA TGACGAAGAT
TACGTGACTG CGCTGGAATA TGGTCTGCCG CCAACCGCTG GTCTGGGTAT TGGTATCGAC
CGAATGATTA TGCTGTTTAC TAACAGCCAT ACTATTCGCG ACGTTATTCT CTTCCCGGCG
ATGCGCCCAC AGAAATAA
 
Protein sequence
MSEQETRGAN EAIDFNDELR NRREKLAALR QQGVAFPNDF RRDHTSEQLH EEFDAKDNQE 
LESLNIEVSV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDSLPEGVYN DQFKKWDLGD
IIGARGTLFK TQTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEVRYRQR YLDLIANDKS
RQTFVVRSKI LAAIRQFMVA RGFMEVETPM MQVIPGGASA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYHDL IELTESLFRT
LAQEVLGTTK VTYGEHVFDF GKPFEKLTMR EAIKKYRPET DMADLDNFDA AKALAESIGI
TVEKSWGLGR IVTEIFDEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAERF QEQVNAKAAG DDEAMFYDED YVTALEYGLP PTAGLGIGID
RMIMLFTNSH TIRDVILFPA MRPQK