| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03936 |
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| Symbol | yjcD |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | + |
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| Start bp | 4185889 |
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| End bp | 4187238 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted permease |
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| Protein accession | ACT45727 |
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| Protein GI | 253980057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0175362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACGC CATCAGCGCG TACCGGCGGT TCACTCGACG CCTGGTTTAA AATTTCACAA
CGTGGAAGCA CTGTCCGTCA GGAAGTGGTT GCCGGGTTAA CAACGTTTCT GGCGATGGTC
TACTCGGTCA TCGTCGTTCC AGGTATGTTG GGTAAAGCAG GCTTCCCGCC TGCGGCAGTT
TTCGTTGCAA CCTGTCTGGT TGCCGGACTC GGTTCTATCG TGATGGGTCT GTGGGCTAAT
CTGCCGTTGG CGATTGGTTG CGCCATCTCC CTGACGGCAT TTACCGCATT CAGCCTGGTG
CTGGGGCAAC ATATTAGCGT ACCTGTCGCG CTGGGTGCCG TGTTCCTGAT GGGTGTGCTG
TTTACGGTAA TTTCTGCCAC GGGTATCCGT AGCTGGATTT TGCGCAACTT GCCGCACGGT
GTGGCGCACG GCACGGGGAT TGGTATCGGT CTGTTCCTGC TGCTCATTGC CGCTAACGGT
GTCGGTCTGG TGATTAAAAA CCCGCTTGAT GGTCTGCCCG TTGCGCTGGG TGATTTCGCG
ACCTTCCCGG TGATTATGTC ACTGGTAGGT CTGGCGGTGA TCATCGGCCT GGAAAAACTG
AAAGTCCCTG GTGGCATTCT GCTGACCATT ATCGGTATCT CAATTGTCGG TTTGATCTTC
GATCCTAACG TCCATTTCTC CGGCGTTTTC GCCATGCCTT CATTGAGCGA TGAAAACGGC
AACTCACTGA TTGGCAGCCT GGACATTATG GGCGCGCTGA ATCCTGTAGT CCTGCCAAGC
GTTCTGGCGC TGGTAATGAC GGCAGTATTT GATGCCACCG GAACTATCCG TGCCGTCGCC
GGCCAGGCGA ACCTGCTGGA TAAAGATGGG CAAATTATCG ACGGTGGGAA AGCACTGACC
ACTGACTCCA TGAGCAGCGT TTTCTCTGGC CTGGTGGGTG CAGCTCCGGC AGCGGTATAC
ATCGAGTCTG CGGCGGGTAC GGCGGCGGGC GGTAAAACCG GTTTGACGGC TATCACCGTT
GGCGTGCTGT TCCTGCTGAT TCTGTTCCTC TCTCCGCTCT CTTACCTCGT TCCGGGGTAT
GCAACGGCTC CGGCGCTGAT GTACGTTGGC CTGCTGATGC TGAGCAACGT GGCGAAAATC
GACTTTGCTG ATTTTGTTGA TGCGATGGCG GGTCTGGTTA CGGCGGTATT CATCGTGCTG
ACCTGTAACA TCGTAACAGG CATCATGATC GGCTTCGCGA CTCTGGTGAT TGGGCGTCTG
GTTTCCGGCG AATGGCGCAA GTTGAACATC GGTACGGTCG TTATCGCCGT GGCGCTGGTG
ACCTTCTATG CGGGTGGCTG GGCTATCTAA
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| Protein sequence | MSTPSARTGG SLDAWFKISQ RGSTVRQEVV AGLTTFLAMV YSVIVVPGML GKAGFPPAAV
FVATCLVAGL GSIVMGLWAN LPLAIGCAIS LTAFTAFSLV LGQHISVPVA LGAVFLMGVL
FTVISATGIR SWILRNLPHG VAHGTGIGIG LFLLLIAANG VGLVIKNPLD GLPVALGDFA
TFPVIMSLVG LAVIIGLEKL KVPGGILLTI IGISIVGLIF DPNVHFSGVF AMPSLSDENG
NSLIGSLDIM GALNPVVLPS VLALVMTAVF DATGTIRAVA GQANLLDKDG QIIDGGKALT
TDSMSSVFSG LVGAAPAAVY IESAAGTAAG GKTGLTAITV GVLFLLILFL SPLSYLVPGY
ATAPALMYVG LLMLSNVAKI DFADFVDAMA GLVTAVFIVL TCNIVTGIMI GFATLVIGRL
VSGEWRKLNI GTVVIAVALV TFYAGGWAI
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